Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MT-TC-201ENST00000387405 66 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.28□□□□□ -1.72
COL15A1P39059 HMGN1P24-201ENST00000412282 298 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.28□□□□□ -1.72
COL15A1P39059 AC104651.1-201ENST00000427559 735 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AL022238.1-201ENST00000442557 355 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.28□□□□□ -1.72
COL15A1P39059 NDUFS5P3-201ENST00000450668 321 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AL645939.1-201ENST00000453429 797 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AP000926.1-201ENST00000479573 241 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC021205.2-201ENST00000480069 347 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC023424.2-201ENST00000493479 777 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.28□□□□□ -1.72
COL15A1P39059 NARSP2-201ENST00000518524 679 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.28□□□□□ -1.72
COL15A1P39059 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.28□□□□□ -1.72
COL15A1P39059 AC004024.1-201ENST00000549244 247 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
COL15A1P39059 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.28□□□□□ -1.72
COL15A1P39059 EIF1P4-201ENST00000572664 335 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC090615.1-201ENST00000577519 154 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 MIR4738-201ENST00000579134 87 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 AL451007.1-201ENST00000595491 289 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AL359999.1-201ENST00000604513 294 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.28□□□□□ -1.72
COL15A1P39059 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.28□□□□□ -1.72
COL15A1P39059 AC006386.2-201ENST00000624491 75 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 AC012005.1-201ENST00000624575 75 ntBASIC4.28□□□□□ -1.72
COL15A1P39059 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.28□□□□□ -1.72
COL15A1P39059 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.28□□□□□ -1.72
COL15A1P39059 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.72
COL15A1P39059 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 RNU6-730P-201ENST00000383954 104 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 SNORA70E-201ENST00000384492 135 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 MTND4LP20-201ENST00000402379 270 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC010975.2-201ENST00000427781 588 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 C8orf59P1-201ENST00000429930 303 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 FTH1P6-201ENST00000430768 320 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 NANOGNBP1-201ENST00000448444 480 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 RPS20P32-201ENST00000456044 356 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC109925.1-201ENST00000478069 331 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC096751.1-202ENST00000502691 1067 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC138853.1-201ENST00000503549 823 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 APOOP4-201ENST00000513530 597 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL15A1P39059 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.27□□□□□ -1.73
COL15A1P39059 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AL353997.4-201ENST00000586196 166 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AP001506.1-201ENST00000615444 211 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC027287.1-201ENST00000553115 1453 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL15A1P39059 AC012020.1-201ENST00000624541 1728 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
COL15A1P39059 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AL035425.3-201ENST00000564206 4996 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RNU5A-6P-201ENST00000384136 116 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RNU6-517P-201ENST00000384362 110 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RNU6-297P-201ENST00000384636 107 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RPL23AP48-201ENST00000406913 488 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 Y_RNA.608-201ENST00000410647 95 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.27□□□□□ -1.73
COL15A1P39059 AL353678.1-201ENST00000422735 741 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC007742.1-201ENST00000425789 329 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 ELOCP26-201ENST00000436067 329 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC073614.1-201ENST00000438690 650 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 FAM103A2P-201ENST00000444122 354 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AL357552.1-201ENST00000445254 415 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 RPS20P24-201ENST00000457473 361 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL15A1P39059 AC096576.1-201ENST00000489014 359 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 FCF1P3-201ENST00000496394 590 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.27□□□□□ -1.73
COL15A1P39059 LARP7P3-201ENST00000579888 337 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.27□□□□□ -1.73
COL15A1P39059 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.27□□□□□ -1.73
COL15A1P39059 AC098614.4-201ENST00000607601 462 ntBASIC4.27□□□□□ -1.73
COL15A1P39059 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms