Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD10P28358 RNU6-657P-201ENST00000383904 107 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HOXD10P28358 SNORD65.1-201ENST00000390889 71 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 CYCSP45-201ENST00000402289 315 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD10P28358 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD10P28358 AL035410.1-201ENST00000427409 427 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 GTF2IP3-201ENST00000433887 494 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AC093155.1-201ENST00000440164 826 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 MTCO1P53-201ENST00000441633 699 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 PABPC1P3-201ENST00000469174 459 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 MTATP6P9-201ENST00000515039 680 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD10P28358 AC104027.1-201ENST00000521887 300 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 ARL2BPP5-201ENST00000523141 481 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXD10P28358 SNRPGP16-201ENST00000533275 226 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXD10P28358 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXD10P28358 MIR5708-201ENST00000579723 85 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.12□□□□□ -1.91
HOXD10P28358 AP001330.4-201ENST00000604350 154 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXD10P28358 AC016597.2-201ENST00000613256 341 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AC010975.3-201ENST00000618727 978 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 AC026634.1-201ENST00000634369 198 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXD10P28358 DBF4P1-201ENST00000412976 1892 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD10P28358 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD10P28358 RNU5E-10P-201ENST00000363506 118 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 SUGT1P1-201ENST00000379514 476 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 SNORA36C-201ENST00000384289 132 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD10P28358 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD10P28358 AC006960.1-201ENST00000419980 153 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD10P28358 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD10P28358 RPL23AP16-201ENST00000441715 421 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 snoU109.3-201ENST00000459477 145 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD10P28358 AC010376.1-201ENST00000522101 334 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXD10P28358 SULT1C2P1-202ENST00000562418 459 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD10P28358 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXD10P28358 BNIP3P40-201ENST00000596017 556 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC245884.10-201ENST00000597355 337 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC010620.2-201ENST00000600135 313 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 U73023.1-201ENST00000603134 700 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AL160237.3-201ENST00000604114 1013 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC008277.2-201ENST00000605196 797 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC112220.2-201ENST00000605513 533 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC091946.2-201ENST00000606105 291 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC106028.5-201ENST00000610332 395 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC140725.3-201ENST00000616193 880 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 AC009039.2-201ENST00000624524 529 ntBASIC3.11□□□□□ -1.91
HOXD10P28358 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD10P28358 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXD10P28358 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXD10P28358 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD10P28358 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD10P28358 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNU6-1066P-201ENST00000363573 105 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 Y_RNA.408-201ENST00000383987 102 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNU6-224P-201ENST00000384055 107 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNU6-1300P-201ENST00000391046 108 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNU6-1242P-201ENST00000391052 103 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RPS4XP7-201ENST00000406274 780 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNA5SP425-201ENST00000410336 112 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD10P28358 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD10P28358 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD10P28358 AL645638.1-201ENST00000440519 361 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXD10P28358 OR10R1P-201ENST00000441524 1141 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 TRBV26-201ENST00000456572 344 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 snoU13.23-201ENST00000458863 104 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD10P28358 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.1□□□□□ -1.91
HOXD10P28358 UBE2V1P12-201ENST00000503954 474 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD10P28358 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD10P28358 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD10P28358 ZNF705CP-201ENST00000530515 889 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC090502.2-201ENST00000549267 280 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 LSM6P2-201ENST00000552208 177 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXD10P28358 AL049838.1-201ENST00000563647 981 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms