Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ABCD3P28288 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
ABCD3P28288 AC128657.1-201ENST00000549459 145 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 AC137800.2-201ENST00000574375 120 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 MIR4474-201ENST00000579189 78 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCD3P28288 RSL24D1P11-201ENST00000591045 491 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC022146.1-201ENST00000595307 847 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AL020997.2-201ENST00000602607 184 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC013553.2-201ENST00000604244 589 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC093783.1-201ENST00000612976 329 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC068831.7-201ENST00000616954 363 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 AC006338.1-201ENST00000618453 749 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCD3P28288 UBE3AP2-201ENST00000429033 2259 ntBASIC3.58□□□□□ -1.84
ABCD3P28288 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ABCD3P28288 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ABCD3P28288 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ABCD3P28288 IPO8P1-201ENST00000455509 3109 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ABCD3P28288 RNU6-511P-201ENST00000363496 107 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ABCD3P28288 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 MIR199A2-201ENST00000385289 110 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ABCD3P28288 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.57□□□□□ -1.84
ABCD3P28288 RNU6-248P-201ENST00000410720 107 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ABCD3P28288 MTCO2P34-201ENST00000421994 607 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 AL356535.1-201ENST00000440335 398 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 USP9YP15-201ENST00000442391 422 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL022238.1-201ENST00000442557 355 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 USP9YP29-201ENST00000445112 563 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.57□□□□□ -1.84
ABCD3P28288 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 NANOGP10-201ENST00000453325 895 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 MTCO2P18-201ENST00000457151 658 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC084357.1-201ENST00000473404 255 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 RN7SL323P-201ENST00000494712 295 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 NDUFB4P2-201ENST00000509515 391 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 RNU2-46P-201ENST00000517038 113 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 RNA5SP291-201ENST00000517222 105 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 AC040904.1-201ENST00000590850 223 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC002545.1-201ENST00000592511 181 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC119751.7-201ENST00000600494 245 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.6-201ENST00000603753 252 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.11-201ENST00000604059 253 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL358072.1-201ENST00000604156 575 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC008162.1-201ENST00000604718 254 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.1-201ENST00000604752 252 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AC064872.1-201ENST00000604823 1072 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.5-201ENST00000605253 252 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.12-201ENST00000605291 253 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.8-201ENST00000605353 252 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL670379.7-201ENST00000605823 252 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL354798.1-201ENST00000622505 329 ntBASIC3.57□□□□□ -1.84
ABCD3P28288 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.57□□□□□ -1.84
ABCD3P28288 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ABCD3P28288 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.57□□□□□ -1.84
ABCD3P28288 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
ABCD3P28288 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 FAM35BP-202ENST00000497389 3337 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 RPS4XP5-202ENST00000449995 1334 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 Y_RNA.51-201ENST00000362725 102 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 U8.3-201ENST00000363321 132 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 RNU4-1-201ENST00000363925 141 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 RNU6-297P-201ENST00000384636 107 ntBASIC3.56□□□□□ -1.84
ABCD3P28288 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ABCD3P28288 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.56□□□□□ -1.84
ABCD3P28288 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
ABCD3P28288 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms