Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.47□□□□□ -2.17
VCANP13611 TPT1P14-201ENST00000448018 505 ntBASIC1.47□□□□□ -2.17
VCANP13611 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCANP13611 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCANP13611 HMGB3P26-201ENST00000560051 582 ntBASIC1.47□□□□□ -2.17
VCANP13611 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.47□□□□□ -2.17
VCANP13611 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VCANP13611 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCANP13611 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCANP13611 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VCANP13611 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.47□□□□□ -2.17
VCANP13611 IPMKP1-201ENST00000425988 855 ntBASIC1.47□□□□□ -2.17
VCANP13611 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.47□□□□□ -2.17
VCANP13611 EEF1B2P4-201ENST00000551398 348 ntBASIC1.47□□□□□ -2.17
VCANP13611 BNIP3P7-201ENST00000605641 516 ntBASIC1.47□□□□□ -2.17
VCANP13611 RNU6-105P-201ENST00000363909 104 ntBASIC1.46□□□□□ -2.18
VCANP13611 SNORA40.6-201ENST00000391153 128 ntBASIC1.46□□□□□ -2.18
VCANP13611 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
VCANP13611 AL445669.1-201ENST00000426743 755 ntBASIC1.46□□□□□ -2.18
VCANP13611 RPL34P26-201ENST00000445636 354 ntBASIC1.46□□□□□ -2.18
VCANP13611 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VCANP13611 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.46□□□□□ -2.18
VCANP13611 AC084851.1-201ENST00000529105 249 ntBASIC1.46□□□□□ -2.18
VCANP13611 DUXAP5-201ENST00000529668 529 ntBASIC1.46□□□□□ -2.18
VCANP13611 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.46□□□□□ -2.18
VCANP13611 MIR2909-201ENST00000617113 69 ntBASIC1.46□□□□□ -2.18
VCANP13611 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.46□□□□□ -2.18
VCANP13611 AC007256.1-201ENST00000392253 2765 ntBASIC1.46□□□□□ -2.18
VCANP13611 RNU6-716P-201ENST00000365621 103 ntBASIC1.46□□□□□ -2.18
VCANP13611 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
VCANP13611 AL590095.2-201ENST00000604136 117 ntBASIC1.46□□□□□ -2.18
VCANP13611 AC097468.3-201ENST00000607956 456 ntBASIC1.46□□□□□ -2.18
VCANP13611 AP000676.4-201ENST00000624659 623 ntBASIC1.46□□□□□ -2.18
VCANP13611 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VCANP13611 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VCANP13611 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.45□□□□□ -2.18
VCANP13611 MTND1P23-201ENST00000416931 372 ntBASIC1.45□□□□□ -2.18
VCANP13611 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.45□□□□□ -2.18
VCANP13611 AL139286.1-201ENST00000604465 483 ntBASIC1.45□□□□□ -2.18
VCANP13611 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VCANP13611 uc_338.12-201ENST00000616344 181 ntBASIC1.45□□□□□ -2.18
VCANP13611 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.45□□□□□ -2.18
VCANP13611 AC004022.1-201ENST00000447766 1066 ntBASIC1.45□□□□□ -2.18
VCANP13611 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.45□□□□□ -2.18
VCANP13611 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.45□□□□□ -2.18
VCANP13611 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VCANP13611 MIR4723-201ENST00000585070 81 ntBASIC1.45□□□□□ -2.18
VCANP13611 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
VCANP13611 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.45□□□□□ -2.18
VCANP13611 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.45□□□□□ -2.18
VCANP13611 AC090071.1-201ENST00000507713 644 ntBASIC1.45□□□□□ -2.18
VCANP13611 RNU6-113P-201ENST00000516653 101 ntBASIC1.45□□□□□ -2.18
VCANP13611 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.45□□□□□ -2.18
VCANP13611 AL109653.1-201ENST00000603091 248 ntBASIC1.45□□□□□ -2.18
VCANP13611 AC073869.7-201ENST00000640874 297 ntBASIC1.45□□□□□ -2.18
VCANP13611 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VCANP13611 AL450326.2-201ENST00000421913 1962 ntBASIC1.44□□□□□ -2.18
VCANP13611 ZNF734P-201ENST00000419494 1534 ntBASIC1.44□□□□□ -2.18
VCANP13611 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
VCANP13611 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.44□□□□□ -2.18
VCANP13611 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.44□□□□□ -2.18
VCANP13611 AC007229.1-201ENST00000590455 412 ntBASIC1.44□□□□□ -2.18
VCANP13611 AL021368.2-201ENST00000606125 5352 ntBASIC1.44□□□□□ -2.18
VCANP13611 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC090453.1-201ENST00000495560 436 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC022447.3-201ENST00000506865 495 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC114786.4-201ENST00000508771 728 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC114797.1-201ENST00000514003 728 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.44□□□□□ -2.18
VCANP13611 AC006329.2-201ENST00000611491 394 ntBASIC1.44□□□□□ -2.18
VCANP13611 MTND5P9-201ENST00000503854 1755 ntBASIC1.44□□□□□ -2.18
VCANP13611 AC135776.4-201ENST00000624300 1904 ntBASIC1.44□□□□□ -2.18
VCANP13611 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.44□□□□□ -2.18
VCANP13611 RPL35AP22-201ENST00000436855 335 ntBASIC1.44□□□□□ -2.18
VCANP13611 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.44□□□□□ -2.18
VCANP13611 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
VCANP13611 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VCANP13611 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.44□□□□□ -2.18
VCANP13611 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VCANP13611 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VCANP13611 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
VCANP13611 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VCANP13611 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VCANP13611 MIRLET7G-201ENST00000362280 84 ntBASIC1.43□□□□□ -2.18
VCANP13611 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VCANP13611 RPS12P24-201ENST00000412619 387 ntBASIC1.43□□□□□ -2.18
VCANP13611 GTF2IP7-202ENST00000436677 309 ntBASIC1.43□□□□□ -2.18
VCANP13611 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.43□□□□□ -2.18
VCANP13611 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.43□□□□□ -2.18
VCANP13611 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.43□□□□□ -2.18
VCANP13611 RNF6P1-201ENST00000444889 1784 ntBASIC1.43□□□□□ -2.18
VCANP13611 HSPE1P11-201ENST00000339579 310 ntBASIC1.43□□□□□ -2.18
VCANP13611 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.43□□□□□ -2.18
VCANP13611 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.43□□□□□ -2.18
VCANP13611 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.43□□□□□ -2.18
VCANP13611 HAUS1P1-201ENST00000505275 832 ntBASIC1.43□□□□□ -2.18
VCANP13611 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.43□□□□□ -2.18
VCANP13611 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.43□□□□□ -2.18
VCANP13611 AF186190.1-201ENST00000517470 480 ntBASIC1.43□□□□□ -2.18
VCANP13611 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms