Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 BNIP3P10-201ENST00000605360 577 ntBASIC1.79□□□□□ -2.12
TNFP01375 AC091834.1-201ENST00000614543 472 ntBASIC1.79□□□□□ -2.12
TNFP01375 AC068722.2-201ENST00000618734 544 ntBASIC1.79□□□□□ -2.12
TNFP01375 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TNFP01375 AL031601.2-202ENST00000622650 282 ntBASIC1.79□□□□□ -2.12
TNFP01375 MTND4P1-201ENST00000457501 1466 ntBASIC1.79□□□□□ -2.12
TNFP01375 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
TNFP01375 OR4G2P-202ENST00000641004 1759 ntBASIC1.78□□□□□ -2.12
TNFP01375 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFP01375 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TNFP01375 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TNFP01375 AL355497.1-201ENST00000406262 551 ntBASIC1.78□□□□□ -2.12
TNFP01375 AL512504.1-201ENST00000415494 778 ntBASIC1.78□□□□□ -2.12
TNFP01375 RPL7P30-201ENST00000420888 709 ntBASIC1.78□□□□□ -2.12
TNFP01375 AL445687.1-201ENST00000439946 251 ntBASIC1.78□□□□□ -2.12
TNFP01375 SNRPGP6-201ENST00000451124 220 ntBASIC1.78□□□□□ -2.12
TNFP01375 RNU7-26P-201ENST00000458980 63 ntBASIC1.78□□□□□ -2.12
TNFP01375 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFP01375 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFP01375 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFP01375 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.78□□□□□ -2.12
TNFP01375 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.78□□□□□ -2.12
TNFP01375 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.78□□□□□ -2.12
TNFP01375 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TNFP01375 AL391813.2-201ENST00000609113 322 ntBASIC1.78□□□□□ -2.12
TNFP01375 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.78□□□□□ -2.12
TNFP01375 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.78□□□□□ -2.12
TNFP01375 SGO1P2-201ENST00000429458 1589 ntBASIC1.77□□□□□ -2.13
TNFP01375 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TNFP01375 HSPE1P11-201ENST00000339579 310 ntBASIC1.77□□□□□ -2.13
TNFP01375 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
TNFP01375 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
TNFP01375 MIR1294-201ENST00000408503 142 ntBASIC1.77□□□□□ -2.13
TNFP01375 RPL17P12-201ENST00000413391 526 ntBASIC1.77□□□□□ -2.13
TNFP01375 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFP01375 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.77□□□□□ -2.13
TNFP01375 IPO7P1-201ENST00000442031 636 ntBASIC1.77□□□□□ -2.13
TNFP01375 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFP01375 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.77□□□□□ -2.13
TNFP01375 MTCYBP14-201ENST00000457471 715 ntBASIC1.77□□□□□ -2.13
TNFP01375 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 Y_RNA.638-201ENST00000459374 113 ntBASIC1.77□□□□□ -2.13
TNFP01375 snoU13.3-201ENST00000459441 104 ntBASIC1.77□□□□□ -2.13
TNFP01375 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFP01375 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.77□□□□□ -2.13
TNFP01375 TRAV28-201ENST00000557548 323 ntBASIC1.77□□□□□ -2.13
TNFP01375 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AC090751.1-201ENST00000566966 267 ntBASIC1.77□□□□□ -2.13
TNFP01375 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFP01375 HMGB1P24-202ENST00000615653 685 ntBASIC1.77□□□□□ -2.13
TNFP01375 DUXAP9-208ENST00000622815 614 ntBASIC1.77□□□□□ -2.13
TNFP01375 AC012640.5-201ENST00000623897 319 ntBASIC1.77□□□□□ -2.13
TNFP01375 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFP01375 RNA5SP213-201ENST00000391031 106 ntBASIC1.76□□□□□ -2.13
TNFP01375 AP002784.2-201ENST00000397300 549 ntBASIC1.76□□□□□ -2.13
TNFP01375 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
TNFP01375 AL356320.2-201ENST00000417263 507 ntBASIC1.76□□□□□ -2.13
TNFP01375 MTCO3P4-201ENST00000419236 787 ntBASIC1.76□□□□□ -2.13
TNFP01375 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.76□□□□□ -2.13
TNFP01375 SRIP2-201ENST00000428470 166 ntBASIC1.76□□□□□ -2.13
TNFP01375 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.76□□□□□ -2.13
TNFP01375 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.76□□□□□ -2.13
TNFP01375 TPTE2P6-202ENST00000445572 1007 ntBASIC1.76□□□□□ -2.13
TNFP01375 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.76□□□□□ -2.13
TNFP01375 AC078857.1-201ENST00000469870 667 ntBASIC1.76□□□□□ -2.13
TNFP01375 RPS27P21-201ENST00000486977 252 ntBASIC1.76□□□□□ -2.13
TNFP01375 CKS1BP2-201ENST00000497342 240 ntBASIC1.76□□□□□ -2.13
TNFP01375 AC111000.5-201ENST00000506559 1178 ntBASIC1.76□□□□□ -2.13
TNFP01375 RNU6-991P-201ENST00000516168 107 ntBASIC1.76□□□□□ -2.13
TNFP01375 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFP01375 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFP01375 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFP01375 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.76□□□□□ -2.13
TNFP01375 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.76□□□□□ -2.13
TNFP01375 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.76□□□□□ -2.13
TNFP01375 HSPA8P4-201ENST00000511877 1920 ntBASIC1.76□□□□□ -2.13
TNFP01375 AL359851.1-201ENST00000569460 4997 ntBASIC1.75□□□□□ -2.13
TNFP01375 MTND4P31-201ENST00000425607 1343 ntBASIC1.75□□□□□ -2.13
TNFP01375 RNU6-263P-201ENST00000363811 107 ntBASIC1.75□□□□□ -2.13
TNFP01375 RNU6-461P-201ENST00000364195 107 ntBASIC1.75□□□□□ -2.13
TNFP01375 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TNFP01375 RNU6-193P-201ENST00000410977 107 ntBASIC1.75□□□□□ -2.13
TNFP01375 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.75□□□□□ -2.13
TNFP01375 AL590762.3-201ENST00000436372 640 ntBASIC1.75□□□□□ -2.13
TNFP01375 BUD31P2-201ENST00000449374 300 ntBASIC1.75□□□□□ -2.13
TNFP01375 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFP01375 HMGB1P26-201ENST00000452520 628 ntBASIC1.75□□□□□ -2.13
TNFP01375 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
TNFP01375 AC109471.1-201ENST00000511631 612 ntBASIC1.75□□□□□ -2.13
TNFP01375 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFP01375 RNA5SP458-201ENST00000516188 119 ntBASIC1.75□□□□□ -2.13
TNFP01375 RNU6-250P-201ENST00000516958 103 ntBASIC1.75□□□□□ -2.13
TNFP01375 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFP01375 MIR3117-201ENST00000584034 78 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms