Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AL157770.1-201ENST00000623049 439 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AC126544.2-201ENST00000625174 749 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 ZNF663P-202ENST00000641770 1131 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 AL136360.1-201ENST00000503377 1900 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF4O95639 GDI2P1-201ENST00000429312 1336 ntBASIC2.08□□□□□ -2.08
CPSF4O95639 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4O95639 MTCO1P23-201ENST00000415223 1526 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.07□□□□□ -2.08
CPSF4O95639 SNORA36C-201ENST00000384289 132 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 SNORD65.1-201ENST00000390889 71 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AL079342.2-201ENST00000403367 482 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC096533.1-201ENST00000411645 353 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 LUZP4P1-201ENST00000415420 344 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC233728.2-201ENST00000425348 757 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC093155.1-201ENST00000440164 826 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 MTCYBP42-201ENST00000444653 1130 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC104629.1-201ENST00000494226 508 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AIG1P1-201ENST00000503376 148 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC069306.1-201ENST00000507006 843 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC114781.4-201ENST00000513707 639 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4O95639 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC022690.1-201ENST00000526681 550 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 NDUFS5P6-201ENST00000529136 295 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4O95639 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.07□□□□□ -2.08
CPSF4O95639 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 MIR5708-201ENST00000579723 85 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 COX6CP3-201ENST00000580869 223 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 AP001521.1-201ENST00000609150 300 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 SNHG22-203ENST00000617833 660 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC253576.2-201ENST00000618815 580 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC091046.2-201ENST00000620775 665 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 AC025034.2-201ENST00000623264 286 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 FO624990.1-201ENST00000636373 85 ntBASIC2.07□□□□□ -2.08
CPSF4O95639 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF4O95639 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF4O95639 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4O95639 RNU1-91P-201ENST00000364746 163 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CPSF4O95639 RNU6-1074P-201ENST00000383995 104 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CPSF4O95639 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 HMGB1P11-201ENST00000413899 637 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 USP9YP21-201ENST00000420603 432 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 WARS2P1-201ENST00000429678 537 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 SEPT7P5-201ENST00000434048 306 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4O95639 MTND2P19-201ENST00000449129 1012 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AP001486.1-201ENST00000463339 476 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC004263.1-201ENST00000479327 332 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 RPL23AP49-201ENST00000492925 468 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 AC027309.2-201ENST00000520566 192 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.06□□□□□ -2.08
CPSF4O95639 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4O95639 AP001029.3-201ENST00000588063 596 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF4O95639 RPL12P50-201ENST00000603116 116 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AL049779.4-201ENST00000604500 156 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC007938.3-201ENST00000604965 623 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC055876.5-201ENST00000605667 259 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC013562.2-201ENST00000611632 603 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AL355810.1-201ENST00000614629 552 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC010975.3-201ENST00000618727 978 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AL360181.4-201ENST00000621752 134 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC243829.7-201ENST00000633081 225 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF4O95639 MFSD8-245ENST00000641743 948 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4O95639 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF4O95639 AC233263.6-201ENST00000631132 1963 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 CKAP2P1-201ENST00000555477 2049 ntBASIC2.06□□□□□ -2.08
CPSF4O95639 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF4O95639 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF4O95639 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF4O95639 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPSF4O95639 ANKRD36P1-201ENST00000344424 659 ntBASIC2.05□□□□□ -2.08
CPSF4O95639 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF4O95639 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4O95639 AL122016.1-201ENST00000403365 367 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms