Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA1O95477 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA1O95477 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ABCA1O95477 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA1O95477 AL121972.1-201ENST00000402023 252 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 RNU6-1077P-201ENST00000410506 102 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC099677.1-201ENST00000420575 175 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC233728.2-201ENST00000425348 757 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 RPL21P66-201ENST00000426566 466 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA1O95477 RPL31P20-201ENST00000449593 360 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA1O95477 AC090515.1-201ENST00000465295 476 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AL163540.1-201ENST00000485382 386 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA1O95477 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA1O95477 RAC1P5-201ENST00000512182 576 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.47□□□□□ -2.17
ABCA1O95477 SNRPGP16-201ENST00000533275 226 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA1O95477 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA1O95477 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA1O95477 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA1O95477 RNU6-582P-201ENST00000362989 107 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA1O95477 RNU6-1027P-201ENST00000383998 107 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 RPS4XP3-201ENST00000398541 413 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 MIR1250-201ENST00000408098 113 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA1O95477 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA1O95477 HMGN2P38-201ENST00000423806 265 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.47□□□□□ -2.17
ABCA1O95477 Z73417.1-201ENST00000447373 778 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA1O95477 AC009901.1-201ENST00000506703 541 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AP004371.1-201ENST00000525240 214 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA1O95477 AC104581.2-201ENST00000572227 430 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 DUXAP4-201ENST00000603046 613 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 MIR6779-201ENST00000617283 64 ntBASIC1.47□□□□□ -2.17
ABCA1O95477 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA1O95477 RNU6-629P-201ENST00000384061 103 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.46□□□□□ -2.18
ABCA1O95477 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA1O95477 OR4K11P-201ENST00000431829 904 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 SSXP1-201ENST00000453640 473 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA1O95477 RPL23AP55-201ENST00000498163 452 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA1O95477 CBX3P4-201ENST00000538909 354 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC135279.1-201ENST00000543493 504 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC010615.3-201ENST00000597319 394 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AL109653.1-201ENST00000603091 248 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC090525.3-201ENST00000605601 189 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC012360.2-201ENST00000609349 391 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.46□□□□□ -2.18
ABCA1O95477 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
ABCA1O95477 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
ABCA1O95477 RNA5SP139-201ENST00000364340 117 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 RPS24P6-201ENST00000452670 400 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.46□□□□□ -2.18
ABCA1O95477 AC004062.1-201ENST00000509926 645 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA1O95477 AC004923.2-201ENST00000529649 369 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ABCA1O95477 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA1O95477 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.46□□□□□ -2.18
ABCA1O95477 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA1O95477 AC073111.2-201ENST00000605657 1075 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AP005212.4-201ENST00000614206 710 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 LINC00216-201ENST00000623548 1126 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 AC026241.1-201ENST00000517873 2142 ntBASIC1.46□□□□□ -2.18
ABCA1O95477 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
ABCA1O95477 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ABCA1O95477 RNA5SP325-201ENST00000363756 130 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AP000275.1-201ENST00000411943 390 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA1O95477 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA1O95477 HMGB1P27-201ENST00000431429 603 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 RPS26P56-201ENST00000444468 240 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 RPL21P134-201ENST00000453468 483 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AC023424.2-201ENST00000493479 777 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA1O95477 SNORA25.15-201ENST00000516487 89 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 ZNF92P3-201ENST00000596594 954 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA1O95477 AL158801.5-201ENST00000623123 465 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA1O95477 AL355578.1-201ENST00000607405 1328 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
ABCA1O95477 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA1O95477 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ABCA1O95477 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA1O95477 MTND1P23-201ENST00000416931 372 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 AL358453.1-201ENST00000422522 250 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.45□□□□□ -2.18
ABCA1O95477 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA1O95477 AL392003.1-201ENST00000434394 243 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms