Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MTHFD2P2-201ENST00000407725 247 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 RNU2-15P-201ENST00000410692 191 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 RNU4-47P-201ENST00000410876 114 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 MTND4LP11-201ENST00000422184 280 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL353678.1-201ENST00000422735 741 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 TIMM9P3-201ENST00000428659 274 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC012170.1-201ENST00000495139 359 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC022616.6-201ENST00000520479 119 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC004024.1-201ENST00000549244 247 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC245014.2-201ENST00000603689 287 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 IGHV3-29-201ENST00000604817 344 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC246785.4-201ENST00000605374 287 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC093732.2-201ENST00000607950 274 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AC009159.1-201ENST00000618386 642 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AL158209.2-201ENST00000619266 216 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 PABPC1P7-201ENST00000413177 1513 ntBASIC5.21□□□□□ -1.58
RAPGEF3O95398 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPGEF3O95398 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPGEF3O95398 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC092435.4-201ENST00000623012 4159 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC092125.1-201ENST00000562568 1995 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 RNU6-97P-201ENST00000363387 104 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 RNU1-140P-201ENST00000365040 165 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 RNU6-1207P-201ENST00000384343 107 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 MRPL42P2-201ENST00000403169 426 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 HDGFP1-201ENST00000405943 252 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 MIR1250-201ENST00000408098 113 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC004987.3-201ENST00000413879 771 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 OOSP1P1-201ENST00000423265 274 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 MTCYBP45-201ENST00000435243 565 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC003071.1-201ENST00000451219 789 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 RPL23AP41-201ENST00000484754 458 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 HMGB1P29-201ENST00000505659 499 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC110794.1-201ENST00000505816 425 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 FCF1P8-201ENST00000510322 597 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AF250324.2-201ENST00000608299 610 ntBASIC5.2□□□□□ -1.58
RAPGEF3O95398 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPGEF3O95398 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RAPGEF3O95398 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPGEF3O95398 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPGEF3O95398 Y_RNA.248-201ENST00000364501 109 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 HSPD1P16-201ENST00000402302 394 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AL589872.1-201ENST00000426602 288 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 OR51AB1P-201ENST00000429046 620 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 PSMA2P3-201ENST00000429685 675 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 RPS20P24-201ENST00000457473 361 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC010493.1-201ENST00000513479 292 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 CENPUP2-201ENST00000555897 1186 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AL133241.1-201ENST00000556832 487 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC067852.3-201ENST00000589177 561 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 BX664608.1-201ENST00000610519 487 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 AC090970.3-201ENST00000612566 866 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RAPGEF3O95398 AL359893.1-201ENST00000447628 1580 ntBASIC5.19□□□□□ -1.58
RAPGEF3O95398 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RAPGEF3O95398 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms