Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ATP1B3P1-201ENST00000605365 821 ntBASIC2.5□□□□□ -2.01
SEMA3DO95025 AC106028.5-201ENST00000610332 395 ntBASIC2.5□□□□□ -2.01
SEMA3DO95025 AC034102.8-201ENST00000615146 484 ntBASIC2.5□□□□□ -2.01
SEMA3DO95025 AC109454.4-201ENST00000623411 649 ntBASIC2.5□□□□□ -2.01
SEMA3DO95025 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.5□□□□□ -2.01
SEMA3DO95025 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.5□□□□□ -2.01
SEMA3DO95025 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SEMA3DO95025 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.5□□□□□ -2.01
SEMA3DO95025 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SEMA3DO95025 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA3DO95025 AP005901.5-201ENST00000545779 1796 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC008669.1-201ENST00000565823 2178 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 Y_RNA.25-201ENST00000362528 102 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 Y_RNA.578-201ENST00000390903 88 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AL356057.3-201ENST00000402607 340 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 RNU2-42P-201ENST00000410697 113 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AL161449.1-201ENST00000414531 1199 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 RPLP0P7-201ENST00000416050 667 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 PTP4A1P7-201ENST00000423476 514 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA3DO95025 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AL589880.1-201ENST00000448271 287 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC005297.2-201ENST00000450430 606 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC073901.1-201ENST00000462471 408 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 RPS15AP34-201ENST00000487776 387 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA3DO95025 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AC006445.2-201ENST00000510061 472 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC093752.1-206ENST00000511823 336 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA3DO95025 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA3DO95025 OR5AK1P-201ENST00000524837 922 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA3DO95025 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA3DO95025 BNIP3P24-201ENST00000593398 557 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 RPL23AP92-201ENST00000603609 255 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC007619.2-201ENST00000605743 379 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC104237.2-201ENST00000612456 443 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AC253576.2-201ENST00000618815 580 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 AP003476.1-201ENST00000623984 516 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.49□□□□□ -2.01
SEMA3DO95025 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA3DO95025 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA3DO95025 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
SEMA3DO95025 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.49□□□□□ -2.01
SEMA3DO95025 AL359693.1-201ENST00000614959 2407 ntBASIC2.49□□□□□ -2.01
SEMA3DO95025 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SEMA3DO95025 OR5J1P-201ENST00000313544 939 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 RNU6-1155P-201ENST00000363554 107 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 MTCO1P56-201ENST00000401674 224 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SEMA3DO95025 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 RPS15AP38-201ENST00000413110 372 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 RPL39P6-201ENST00000448289 150 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.48□□□□□ -2.01
SEMA3DO95025 CACYBPP2-201ENST00000453625 678 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 RBM43P1-201ENST00000476891 1081 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SEMA3DO95025 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AC034159.1-201ENST00000513885 583 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.48□□□□□ -2.01
SEMA3DO95025 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AC125611.1-201ENST00000549563 229 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL035411.2-201ENST00000604022 421 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AC093673.2-201ENST00000609674 331 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 AC009237.15-201ENST00000610252 501 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL356585.4-201ENST00000623078 1229 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.48□□□□□ -2.01
SEMA3DO95025 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SEMA3DO95025 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.48□□□□□ -2.01
SEMA3DO95025 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
SEMA3DO95025 SNRPEP3-201ENST00000338402 276 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 MIR493-201ENST00000385254 89 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 RNU6-298P-201ENST00000390888 96 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms