Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.22□□□□□ -2.05
UPK1BO75841 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.22□□□□□ -2.05
UPK1BO75841 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC092798.1-201ENST00000458542 409 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RPL31P41-201ENST00000477967 372 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC114981.1-201ENST00000503897 678 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC112673.1-201ENST00000513168 575 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNU6-583P-201ENST00000516012 92 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNA5SP282-201ENST00000516355 108 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 SCARNA15.2-201ENST00000516409 127 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.22□□□□□ -2.05
UPK1BO75841 AP002748.2-201ENST00000528671 348 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC009163.5-201ENST00000575421 637 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC103810.1-201ENST00000579873 453 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC126365.2-201ENST00000580630 379 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC068313.1-201ENST00000604028 1008 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC011451.2-201ENST00000604303 598 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC069545.1-201ENST00000605671 358 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC034102.8-201ENST00000615146 484 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC126544.2-201ENST00000625174 749 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.22□□□□□ -2.05
UPK1BO75841 AL356473.1-201ENST00000406203 1408 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC093536.2-201ENST00000565257 1406 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 AL049641.1-201ENST00000441055 1948 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1BO75841 RNU1-105P-201ENST00000363470 161 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 RNU5E-8P-201ENST00000363502 116 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 Y_RNA.234-201ENST00000364409 97 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1BO75841 SNORA9-201ENST00000384215 133 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 RNU6-1122P-201ENST00000384449 107 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 TPMTP2-201ENST00000414372 726 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 OR4K6P-201ENST00000416478 897 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 BX119904.4-201ENST00000424402 301 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC008850.1-201ENST00000427546 362 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UPK1BO75841 AL022578.1-201ENST00000439330 1433 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 MTND2P20-201ENST00000440805 661 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 RNF2P1-201ENST00000442955 1010 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 BX322784.1-201ENST00000455793 1077 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC108734.3-201ENST00000481241 1165 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 PRELID3BP5-201ENST00000508612 460 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 XKRY-201ENST00000510392 1100 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 MRPS36P2-201ENST00000512569 299 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1BO75841 SCGB1D5P-201ENST00000515134 247 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 RNU6-1282P-201ENST00000516735 96 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1BO75841 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.21□□□□□ -2.06
UPK1BO75841 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1BO75841 AC011611.1-201ENST00000552179 197 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AL132857.1-201ENST00000555180 708 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 CKAP2P1-201ENST00000555477 2049 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1BO75841 MTND4LP25-201ENST00000570218 163 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.21□□□□□ -2.06
UPK1BO75841 AC005951.2-201ENST00000576282 495 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 OR1M4P-201ENST00000589199 287 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC068620.3-201ENST00000602749 560 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC245389.1-201ENST00000605141 529 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC024560.3-201ENST00000608482 349 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 MIR378J-201ENST00000611988 109 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC024941.1-201ENST00000612250 334 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AL121772.2-201ENST00000614331 297 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC023158.2-201ENST00000614876 543 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AL603758.1-201ENST00000618654 241 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AL158163.2-201ENST00000619110 700 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC002550.2-201ENST00000621246 394 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.21□□□□□ -2.06
UPK1BO75841 AL161637.1-201ENST00000622380 412 ntBASIC2.21□□□□□ -2.06
UPK1BO75841 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
UPK1BO75841 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
UPK1BO75841 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
UPK1BO75841 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
UPK1BO75841 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
UPK1BO75841 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.2□□□□□ -2.06
UPK1BO75841 AL139276.1-201ENST00000311910 1001 ntBASIC2.2□□□□□ -2.06
UPK1BO75841 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
UPK1BO75841 U3.20-201ENST00000390909 217 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms