Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AL157394.1-201ENST00000562983 1224 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB3O75112 FGF7P1-201ENST00000582820 288 ntBASIC3.53□□□□□ -1.84
LDB3O75112 SNRPGP15-201ENST00000600149 222 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AL117336.2-201ENST00000602435 335 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AL391646.1-201ENST00000603860 190 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AL049634.3-201ENST00000604968 457 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AL365503.1-201ENST00000605247 905 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AC103710.1-201ENST00000610003 901 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AC012150.2-201ENST00000621300 544 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AC009268.2-201ENST00000621925 457 ntBASIC3.53□□□□□ -1.84
LDB3O75112 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
LDB3O75112 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB3O75112 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB3O75112 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB3O75112 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
LDB3O75112 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB3O75112 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB3O75112 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB3O75112 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB3O75112 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB3O75112 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.53□□□□□ -1.85
LDB3O75112 AL157700.1-201ENST00000561973 1432 ntBASIC3.53□□□□□ -1.85
LDB3O75112 AC092326.2-201ENST00000624772 1561 ntBASIC3.52□□□□□ -1.85
LDB3O75112 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB3O75112 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB3O75112 Y_RNA.89-201ENST00000363031 102 ntBASIC3.52□□□□□ -1.85
LDB3O75112 RNU6-853P-201ENST00000364306 107 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LDB3O75112 RNU6-821P-201ENST00000390995 107 ntBASIC3.52□□□□□ -1.85
LDB3O75112 HMGN2P8-201ENST00000391458 268 ntBASIC3.52□□□□□ -1.85
LDB3O75112 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB3O75112 RPS20P2-201ENST00000402520 389 ntBASIC3.52□□□□□ -1.85
LDB3O75112 RNU4-78P-201ENST00000410940 126 ntBASIC3.52□□□□□ -1.85
LDB3O75112 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB3O75112 OR51A5P-201ENST00000415429 942 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB3O75112 AL445584.1-201ENST00000431451 330 ntBASIC3.52□□□□□ -1.85
LDB3O75112 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB3O75112 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB3O75112 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB3O75112 SNRPGP5-201ENST00000456003 220 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB3O75112 RPS29P25-201ENST00000481709 171 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB3O75112 AC105914.1-201ENST00000511798 226 ntBASIC3.52□□□□□ -1.85
LDB3O75112 SAP18P1-201ENST00000512058 390 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
LDB3O75112 RNU6-27P-201ENST00000516146 107 ntBASIC3.52□□□□□ -1.85
LDB3O75112 RNA5SP143-201ENST00000516936 115 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AP003467.2-201ENST00000520175 319 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB3O75112 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.52□□□□□ -1.85
LDB3O75112 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.52□□□□□ -1.85
LDB3O75112 HMGB1P33-201ENST00000563485 527 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AL391840.1-201ENST00000571144 367 ntBASIC3.52□□□□□ -1.85
LDB3O75112 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.52□□□□□ -1.85
LDB3O75112 AL035413.2-201ENST00000604801 525 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC008536.2-201ENST00000607284 349 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC006329.2-201ENST00000611491 394 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC063943.3-201ENST00000615562 356 ntBASIC3.52□□□□□ -1.85
LDB3O75112 AC091925.2-201ENST00000625059 256 ntBASIC3.52□□□□□ -1.85
LDB3O75112 MFSD8-236ENST00000641509 4050 ntBASIC3.52□□□□□ -1.85
LDB3O75112 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
LDB3O75112 FAM35DP-201ENST00000323387 2712 ntBASIC3.52□□□□□ -1.85
LDB3O75112 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB3O75112 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LDB3O75112 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB3O75112 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LDB3O75112 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB3O75112 Y_RNA.295-201ENST00000364918 102 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RNU6-282P-201ENST00000365357 103 ntBASIC3.51□□□□□ -1.85
LDB3O75112 Y_RNA.402-201ENST00000383972 102 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RNU6-483P-201ENST00000384088 108 ntBASIC3.51□□□□□ -1.85
LDB3O75112 SNORD51-201ENST00000384320 80 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RNU6-1207P-201ENST00000384343 107 ntBASIC3.51□□□□□ -1.85
LDB3O75112 U8.11-201ENST00000384699 133 ntBASIC3.51□□□□□ -1.85
LDB3O75112 U8.12-201ENST00000384701 133 ntBASIC3.51□□□□□ -1.85
LDB3O75112 SNORD115.1-201ENST00000391109 76 ntBASIC3.51□□□□□ -1.85
LDB3O75112 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 AL445189.1-201ENST00000405722 338 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RPL23AP48-201ENST00000406913 488 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AL583834.1-201ENST00000406943 343 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AL603766.1-201ENST00000407763 664 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RN7SKP202-201ENST00000410439 330 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RN7SKP159-201ENST00000410657 292 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AMD1P2-201ENST00000412936 992 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB3O75112 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RPL36AP36-201ENST00000418616 301 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AL353193.1-201ENST00000421444 268 ntBASIC3.51□□□□□ -1.85
LDB3O75112 MTCO1P20-201ENST00000425366 358 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RPL22P17-201ENST00000438729 315 ntBASIC3.51□□□□□ -1.85
LDB3O75112 MTCO3P18-201ENST00000440206 761 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 Z95327.1-201ENST00000446082 482 ntBASIC3.51□□□□□ -1.85
LDB3O75112 MTND3P10-201ENST00000450967 341 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms