Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 RPL21P8-201ENST00000465083 535 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC104472.2-201ENST00000469035 601 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC108729.1-201ENST00000487812 947 ntBASIC3.01□□□□□ -1.93
SDC3O75056 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 OR2A20P-203ENST00000498397 1268 ntBASIC3.01□□□□□ -1.93
SDC3O75056 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 RNU5A-4P-201ENST00000516588 111 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.01□□□□□ -1.93
SDC3O75056 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
SDC3O75056 COX6CP8-201ENST00000522620 226 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.01□□□□□ -1.93
SDC3O75056 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDC3O75056 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 AL353997.4-201ENST00000586196 166 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC107952.2-201ENST00000606048 486 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 AC092106.3-201ENST00000611308 722 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AP000484.1-201ENST00000620067 1252 ntBASIC3.01□□□□□ -1.93
SDC3O75056 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.01□□□□□ -1.93
SDC3O75056 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDC3O75056 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDC3O75056 AC009812.4-201ENST00000569134 1805 ntBASIC3□□□□□ -1.93
SDC3O75056 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SDC3O75056 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
SDC3O75056 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
SDC3O75056 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3□□□□□ -1.93
SDC3O75056 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3□□□□□ -1.93
SDC3O75056 FRG1BP-201ENST00000278882 761 ntBASIC3□□□□□ -1.93
SDC3O75056 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SDC3O75056 FAM133CP-201ENST00000332869 704 ntBASIC3□□□□□ -1.93
SDC3O75056 SNORD56.3-201ENST00000363507 71 ntBASIC3□□□□□ -1.93
SDC3O75056 RNU6-157P-201ENST00000383957 107 ntBASIC3□□□□□ -1.93
SDC3O75056 SAR1AP2-201ENST00000392696 594 ntBASIC3□□□□□ -1.93
SDC3O75056 SDCBPP3-201ENST00000419629 891 ntBASIC3□□□□□ -1.93
SDC3O75056 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3□□□□□ -1.93
SDC3O75056 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3□□□□□ -1.93
SDC3O75056 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3□□□□□ -1.93
SDC3O75056 ZYG11AP1-201ENST00000430329 837 ntBASIC3□□□□□ -1.93
SDC3O75056 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3□□□□□ -1.93
SDC3O75056 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 MTND5P14-201ENST00000441481 1267 ntBASIC3□□□□□ -1.93
SDC3O75056 AC234775.1-201ENST00000454247 670 ntBASIC3□□□□□ -1.93
SDC3O75056 AL359385.1-201ENST00000456509 365 ntBASIC3□□□□□ -1.93
SDC3O75056 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
SDC3O75056 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3□□□□□ -1.93
SDC3O75056 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 POU5F1P7-201ENST00000508759 541 ntBASIC3□□□□□ -1.93
SDC3O75056 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3□□□□□ -1.93
SDC3O75056 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 AC105185.1-201ENST00000518705 535 ntBASIC3□□□□□ -1.93
SDC3O75056 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3□□□□□ -1.93
SDC3O75056 AC103783.1-201ENST00000520506 373 ntBASIC3□□□□□ -1.93
SDC3O75056 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 DUXAP1-201ENST00000556632 463 ntBASIC3□□□□□ -1.93
SDC3O75056 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3□□□□□ -1.93
SDC3O75056 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
SDC3O75056 AC061975.8-201ENST00000587058 721 ntBASIC3□□□□□ -1.93
SDC3O75056 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3□□□□□ -1.93
SDC3O75056 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
SDC3O75056 ZNF876P-202ENST00000398732 1485 ntBASIC3□□□□□ -1.93
SDC3O75056 FAM35CP-201ENST00000554755 2470 ntBASIC3□□□□□ -1.93
SDC3O75056 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.99□□□□□ -1.93
SDC3O75056 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
SDC3O75056 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 DEFB108F-201ENST00000344638 222 ntBASIC2.99□□□□□ -1.93
SDC3O75056 U3.11-201ENST00000364476 212 ntBASIC2.99□□□□□ -1.93
SDC3O75056 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.99□□□□□ -1.93
SDC3O75056 AC110754.1-201ENST00000399740 601 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AL031121.1-201ENST00000406553 254 ntBASIC2.99□□□□□ -1.93
SDC3O75056 RNU6-757P-201ENST00000410334 100 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.99□□□□□ -1.93
SDC3O75056 RPL7P46-201ENST00000425129 740 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.99□□□□□ -1.93
SDC3O75056 TXNL1P1-201ENST00000429528 554 ntBASIC2.99□□□□□ -1.93
SDC3O75056 MTND1P32-201ENST00000433043 938 ntBASIC2.99□□□□□ -1.93
SDC3O75056 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
SDC3O75056 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.99□□□□□ -1.93
SDC3O75056 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.99□□□□□ -1.93
SDC3O75056 BX322784.1-201ENST00000455793 1077 ntBASIC2.99□□□□□ -1.93
SDC3O75056 RPL31P60-201ENST00000478450 367 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AC021205.2-201ENST00000480069 347 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AC091951.3-201ENST00000504093 246 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDC3O75056 AC034244.1-201ENST00000507687 207 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AL359273.1-201ENST00000510918 627 ntBASIC2.99□□□□□ -1.93
SDC3O75056 AC091826.1-201ENST00000514065 313 ntBASIC2.99□□□□□ -1.93
SDC3O75056 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms