Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TSPAN3O60637 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TSPAN3O60637 PRO1804-201ENST00000623780 2050 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.8□□□□□ -1.8
TSPAN3O60637 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.8□□□□□ -1.8
TSPAN3O60637 RNY4P34-201ENST00000364779 95 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 SNORA23-201ENST00000365128 182 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 Y_RNA.359-201ENST00000365498 102 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 RNU6-297P-201ENST00000384636 107 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 MIR483-201ENST00000385070 76 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 MRPL42P2-201ENST00000403169 426 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 RPS3AP3-201ENST00000411933 242 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC009237.5-201ENST00000414271 501 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 RPS29P4-201ENST00000414733 161 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 RPS15AP12-201ENST00000419498 388 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 HSPD1P21-201ENST00000436541 245 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AL353706.1-201ENST00000436728 494 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.8□□□□□ -1.8
TSPAN3O60637 RPS3AP12-201ENST00000443616 753 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 RPS3AP46-201ENST00000448352 682 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC006480.1-201ENST00000449887 378 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 HMGB3P22-202ENST00000451823 572 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.8□□□□□ -1.8
TSPAN3O60637 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TSPAN3O60637 RN7SKP18-201ENST00000516005 275 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 RNU1-61P-201ENST00000516107 151 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC006960.3-201ENST00000561845 705 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.8□□□□□ -1.8
TSPAN3O60637 CKS1BP3-201ENST00000600888 237 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC064872.1-201ENST00000604823 1072 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC007179.3-201ENST00000604976 235 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC064807.4-201ENST00000607201 407 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC245517.5-201ENST00000611529 162 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC093838.1-201ENST00000613014 469 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 TUG1_2.1-201ENST00000614234 87 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 AC110994.2-201ENST00000635481 492 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.8□□□□□ -1.8
TSPAN3O60637 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TSPAN3O60637 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TSPAN3O60637 AC007823.1-201ENST00000569932 1566 ntBASIC3.8□□□□□ -1.8
TSPAN3O60637 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.8□□□□□ -1.8
TSPAN3O60637 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.79□□□□□ -1.8
TSPAN3O60637 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.79□□□□□ -1.8
TSPAN3O60637 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 RNU5A-1-201ENST00000362698 116 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 RNU1-39P-201ENST00000383897 165 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 AL109755.1-201ENST00000401791 649 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.79□□□□□ -1.8
TSPAN3O60637 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC068533.1-201ENST00000418542 415 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC245054.1-201ENST00000420944 258 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 BX890604.2-201ENST00000427883 474 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 ELOCP30-201ENST00000447108 299 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.79□□□□□ -1.8
TSPAN3O60637 SSXP4-201ENST00000451349 245 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC108059.3-201ENST00000456388 214 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 RPS27AP1-201ENST00000475545 471 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AL049830.2-201ENST00000480072 201 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AL049874.1-201ENST00000489560 388 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 DEFB108A-201ENST00000530110 222 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 MIR3118-1-201ENST00000581787 76 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AF038458.1-201ENST00000588406 262 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 BDH2P1-201ENST00000602288 736 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 KC877982.1-201ENST00000602313 470 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC015871.2-201ENST00000603605 948 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
TSPAN3O60637 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.79□□□□□ -1.8
TSPAN3O60637 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TSPAN3O60637 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
TSPAN3O60637 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
TSPAN3O60637 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TSPAN3O60637 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
TSPAN3O60637 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms