Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRPF3O43395 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 OR1S2-201ENST00000302592 978 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 RNY4P16-201ENST00000364768 94 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 RNU6-259P-201ENST00000383999 107 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 RPS3AP36-201ENST00000398190 775 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC110754.1-201ENST00000399740 601 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.38□□□□□ -1.71
PRPF3O43395 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF3O43395 RPS15AP12-201ENST00000419498 388 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.38□□□□□ -1.71
PRPF3O43395 AL049714.1-201ENST00000466686 347 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PRPF3O43395 HSPE1P6-201ENST00000479457 291 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC092451.1-201ENST00000480211 153 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 RPS4XP13-201ENST00000483219 789 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 BTF3L4P4-201ENST00000506381 449 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF3O43395 AC010342.1-201ENST00000514047 877 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF3O43395 MTND4LP31-201ENST00000514859 294 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF3O43395 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF3O43395 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF3O43395 OR4H12P-201ENST00000556269 907 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF3O43395 MED28P6-201ENST00000558776 231 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 HSPE1P5-201ENST00000561489 272 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF3O43395 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF3O43395 MIR5685-201ENST00000579080 79 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC105224.1-201ENST00000587055 421 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.38□□□□□ -1.71
PRPF3O43395 BDH2P1-201ENST00000602288 736 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC080078.2-201ENST00000603766 501 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AL161729.4-201ENST00000604650 476 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 AC095031.1-201ENST00000623685 672 ntBASIC4.38□□□□□ -1.71
PRPF3O43395 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PRPF3O43395 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF3O43395 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PRPF3O43395 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 AC008725.1-201ENST00000605123 2263 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.37□□□□□ -1.71
PRPF3O43395 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 RNU5E-1-201ENST00000362477 120 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNU5A-1-201ENST00000362698 116 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNA5SP322-201ENST00000363617 119 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNU4-1-201ENST00000363925 141 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 SNORA20.2-201ENST00000383922 131 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 SOD2P1-201ENST00000396543 562 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RN7SKP159-201ENST00000410657 292 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNA5SP107-201ENST00000411358 122 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 CRYBB2P1-203ENST00000415709 538 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF3O43395 ELOCP4-201ENST00000420090 333 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.37□□□□□ -1.71
PRPF3O43395 RPL7L1P10-201ENST00000427790 463 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL590383.1-201ENST00000428602 75 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 RPL26P6-201ENST00000440913 438 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
PRPF3O43395 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 RBM43P1-201ENST00000476891 1081 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 RPL23AP55-201ENST00000498163 452 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF3O43395 AC091133.4-201ENST00000511142 308 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 GMPSP1-201ENST00000514075 579 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF3O43395 RNA5SP337-201ENST00000517007 109 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNU6-64P-201ENST00000517119 105 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 SNORA31.22-201ENST00000517204 135 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF3O43395 AC245505.1-201ENST00000556398 224 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AP005205.1-201ENST00000563503 508 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC087499.8-201ENST00000578406 226 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AF038458.1-201ENST00000588406 262 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 DEFB131E-202ENST00000602581 683 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.6-201ENST00000603753 252 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.11-201ENST00000604059 253 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AP001330.4-201ENST00000604350 154 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AC008162.1-201ENST00000604718 254 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.1-201ENST00000604752 252 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.5-201ENST00000605253 252 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.12-201ENST00000605291 253 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.8-201ENST00000605353 252 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 AL670379.7-201ENST00000605823 252 ntBASIC4.37□□□□□ -1.71
PRPF3O43395 RNU1-30P-201ENST00000606575 163 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms