Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PWAR6-201ENST00000552334 4618 ntBASIC2.92□□□□□ -1.94
CDX4O14627 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDX4O14627 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDX4O14627 AP001350.1-201ENST00000601906 1524 ntBASIC2.92□□□□□ -1.94
CDX4O14627 AP002907.1-201ENST00000606361 1430 ntBASIC2.92□□□□□ -1.94
CDX4O14627 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDX4O14627 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDX4O14627 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDX4O14627 RNA5SP258-201ENST00000362750 119 ntBASIC2.91□□□□□ -1.94
CDX4O14627 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CDX4O14627 U3.29-201ENST00000391296 212 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC110754.1-201ENST00000399740 601 ntBASIC2.91□□□□□ -1.94
CDX4O14627 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
CDX4O14627 MTCO2P5-201ENST00000422621 426 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 BX119904.4-201ENST00000424402 301 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC087499.2-201ENST00000432861 149 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.91□□□□□ -1.94
CDX4O14627 AL590103.1-201ENST00000434488 307 ntBASIC2.91□□□□□ -1.94
CDX4O14627 RPS25P9-201ENST00000435591 252 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AL354941.1-201ENST00000438600 464 ntBASIC2.91□□□□□ -1.94
CDX4O14627 HSPE1P28-201ENST00000443139 211 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC010095.1-201ENST00000443543 144 ntBASIC2.91□□□□□ -1.94
CDX4O14627 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 LINC00888-204ENST00000487386 421 ntBASIC2.91□□□□□ -1.94
CDX4O14627 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX4O14627 AC006390.1-201ENST00000508068 283 ntBASIC2.91□□□□□ -1.94
CDX4O14627 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX4O14627 RNA5SP216-201ENST00000516111 123 ntBASIC2.91□□□□□ -1.94
CDX4O14627 RNY4P37-201ENST00000516225 96 ntBASIC2.91□□□□□ -1.94
CDX4O14627 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CDX4O14627 AC022861.1-201ENST00000522981 663 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX4O14627 AC010738.1-201ENST00000604970 987 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC007619.2-201ENST00000605743 379 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX4O14627 AC040168.1-201ENST00000623594 991 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC139792.2-201ENST00000624218 587 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC243829.7-201ENST00000633081 225 ntBASIC2.91□□□□□ -1.94
CDX4O14627 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDX4O14627 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
CDX4O14627 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDX4O14627 AC244517.1-201ENST00000606030 2086 ntBASIC2.91□□□□□ -1.94
CDX4O14627 AC007256.1-201ENST00000392253 2765 ntBASIC2.9□□□□□ -1.94
CDX4O14627 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDX4O14627 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDX4O14627 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDX4O14627 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
CDX4O14627 OR56A5-201ENST00000340110 738 ntBASIC2.9□□□□□ -1.95
CDX4O14627 RNU6-1249P-201ENST00000363237 111 ntBASIC2.9□□□□□ -1.95
CDX4O14627 Y_RNA.318-201ENST00000365131 97 ntBASIC2.9□□□□□ -1.95
CDX4O14627 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX4O14627 XGY1-201ENST00000381172 446 ntBASIC2.9□□□□□ -1.95
CDX4O14627 SNORD51-201ENST00000384320 80 ntBASIC2.9□□□□□ -1.95
CDX4O14627 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 AL590084.2-201ENST00000401481 382 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AP000567.1-201ENST00000406413 156 ntBASIC2.9□□□□□ -1.95
CDX4O14627 USP9YP33-201ENST00000412220 421 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC007390.1-201ENST00000415722 356 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 NPM1P11-201ENST00000417106 855 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC098592.1-201ENST00000419352 333 ntBASIC2.9□□□□□ -1.95
CDX4O14627 PSMA6P3-201ENST00000428242 164 ntBASIC2.9□□□□□ -1.95
CDX4O14627 USP9YP35-201ENST00000435696 412 ntBASIC2.9□□□□□ -1.95
CDX4O14627 YWHAZP7-201ENST00000436906 631 ntBASIC2.9□□□□□ -1.95
CDX4O14627 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CDX4O14627 HMGB1P12-201ENST00000438594 598 ntBASIC2.9□□□□□ -1.95
CDX4O14627 THAP5P1-201ENST00000439089 262 ntBASIC2.9□□□□□ -1.95
CDX4O14627 MTCYBP34-201ENST00000439552 670 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX4O14627 RPS27AP8-201ENST00000452665 445 ntBASIC2.9□□□□□ -1.95
CDX4O14627 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX4O14627 MTCO3P16-201ENST00000454456 754 ntBASIC2.9□□□□□ -1.95
CDX4O14627 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 HMGN2P16-201ENST00000456802 261 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AL136097.1-201ENST00000456945 913 ntBASIC2.9□□□□□ -1.95
CDX4O14627 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
CDX4O14627 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
CDX4O14627 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 BZW1P2-201ENST00000473537 826 ntBASIC2.9□□□□□ -1.95
CDX4O14627 ST13P14-201ENST00000474095 734 ntBASIC2.9□□□□□ -1.95
CDX4O14627 MTND3P7-201ENST00000474435 343 ntBASIC2.9□□□□□ -1.95
CDX4O14627 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 AC021205.2-201ENST00000480069 347 ntBASIC2.9□□□□□ -1.95
CDX4O14627 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 TMEM251P1-201ENST00000503717 318 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 AC034159.1-201ENST00000513885 583 ntBASIC2.9□□□□□ -1.95
CDX4O14627 RNU4-29P-201ENST00000515943 174 ntBASIC2.9□□□□□ -1.95
CDX4O14627 RNU6-27P-201ENST00000516146 107 ntBASIC2.9□□□□□ -1.95
CDX4O14627 RNU6-232P-201ENST00000517144 64 ntBASIC2.9□□□□□ -1.95
CDX4O14627 DEFB131D-201ENST00000526803 184 ntBASIC2.9□□□□□ -1.95
CDX4O14627 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDX4O14627 OR4P1P-201ENST00000530808 1136 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms