Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CACNA1AO00555 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 RPS15AP6-201ENST00000420703 385 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 AC079804.2-201ENST00000490376 200 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.58□□□□□ -2.16
CACNA1AO00555 AC015720.1-201ENST00000565251 277 ntBASIC1.58□□□□□ -2.16
CACNA1AO00555 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.57□□□□□ -2.16
CACNA1AO00555 SNORD114-23-201ENST00000363536 72 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 RNU4-13P-201ENST00000364019 141 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.57□□□□□ -2.16
CACNA1AO00555 PGBD4P6-201ENST00000421501 610 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.57□□□□□ -2.16
CACNA1AO00555 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
CACNA1AO00555 RNA5SP285-201ENST00000516619 119 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.57□□□□□ -2.16
CACNA1AO00555 HMGB3P26-201ENST00000560051 582 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 MIR4636-201ENST00000582271 80 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AC023043.3-201ENST00000593113 385 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AP000787.2-201ENST00000604432 568 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AC024560.3-201ENST00000608482 349 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
CACNA1AO00555 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.57□□□□□ -2.16
CACNA1AO00555 RNU6-288P-201ENST00000363690 104 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CACNA1AO00555 SNORD88.1-201ENST00000408684 91 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 CBX3P6-201ENST00000430257 527 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AC009314.1-201ENST00000603871 304 ntBASIC1.57□□□□□ -2.16
CACNA1AO00555 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CACNA1AO00555 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.56□□□□□ -2.16
CACNA1AO00555 AL159169.1-201ENST00000421119 127 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 SETP10-201ENST00000424368 814 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 RPL9P33-201ENST00000484311 566 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 AC093752.1-206ENST00000511823 336 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 NF1P5-201ENST00000588287 448 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CACNA1AO00555 HSPE1P11-201ENST00000339579 310 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 RNU6-48P-201ENST00000384161 107 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 MTCO3P31-201ENST00000405526 789 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1AO00555 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.56□□□□□ -2.16
CACNA1AO00555 TPRKBP1-201ENST00000456243 481 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.56□□□□□ -2.16
CACNA1AO00555 AC103810.1-201ENST00000579873 453 ntBASIC1.56□□□□□ -2.16
CACNA1AO00555 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 MIR1323-201ENST00000408090 73 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 AC060773.1-201ENST00000421698 310 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.55□□□□□ -2.16
CACNA1AO00555 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.55□□□□□ -2.16
CACNA1AO00555 AC013444.2-201ENST00000603317 787 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 AC008083.4-201ENST00000615076 444 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.55□□□□□ -2.16
CACNA1AO00555 XKRY2-201ENST00000442362 1093 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 RNA5SP76-201ENST00000516277 87 ntBASIC1.55□□□□□ -2.16
CACNA1AO00555 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.55□□□□□ -2.16
CACNA1AO00555 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1AO00555 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1AO00555 MIR330-201ENST00000362196 94 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1AO00555 IPO7P1-201ENST00000442031 636 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 HMGB3P8-201ENST00000449709 577 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CACNA1AO00555 AC005498.1-201ENST00000592125 465 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 MIR1197-201ENST00000408818 88 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 USP9YP15-201ENST00000442391 422 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CACNA1AO00555 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.54□□□□□ -2.16
CACNA1AO00555 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1AO00555 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.54□□□□□ -2.16
CACNA1AO00555 MTND4LP24-201ENST00000572277 291 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.54□□□□□ -2.16
CACNA1AO00555 AL135786.2-201ENST00000608422 615 ntBASIC1.54□□□□□ -2.16
CACNA1AO00555 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1AO00555 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1AO00555 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CACNA1AO00555 RNA5SP25-201ENST00000410815 110 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 XKRYP4-201ENST00000414395 483 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 AL590664.1-201ENST00000448065 339 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 XKRYP5-201ENST00000449659 483 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 AP001960.1-201ENST00000506494 658 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 AC087373.1-201ENST00000524920 491 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 HSPE1P4-201ENST00000550617 308 ntBASIC1.53□□□□□ -2.16
CACNA1AO00555 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.53□□□□□ -2.16
CACNA1AO00555 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
CACNA1AO00555 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CACNA1AO00555 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.53□□□□□ -2.16
CACNA1AO00555 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CACNA1AO00555 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CACNA1AO00555 RNA5SP27-201ENST00000363839 119 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 RNU6-173P-201ENST00000364215 104 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 SNORA2A-201ENST00000383885 135 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.52□□□□□ -2.17
CACNA1AO00555 BX510359.4-201ENST00000423750 193 ntBASIC1.52□□□□□ -2.17
CACNA1AO00555 RPL23AP14-201ENST00000468281 468 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms