Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL603758.1-201ENST00000618654 241 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AL157786.1-207ENST00000627771 695 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 MAPK10-373ENST00000641983 6772 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 SNORA62-201ENST00000365493 153 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-432P-201ENST00000384196 109 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 CIR1P3-201ENST00000405137 479 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 PPIAP31-201ENST00000405422 495 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 MTCO2P19-201ENST00000427513 598 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 RPL7P28-201ENST00000437739 740 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC016696.1-201ENST00000446949 318 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL162388.1-201ENST00000450912 352 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 RPS3AP14-201ENST00000483907 780 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC007182.2-201ENST00000489251 402 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC019235.1-201ENST00000503847 207 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC109927.2-201ENST00000506416 303 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 PCBP2P3-201ENST00000509726 843 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-1178P-201ENST00000516674 107 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC090572.1-201ENST00000519251 160 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AP003034.1-201ENST00000534621 422 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 MIR4801-201ENST00000582704 82 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC053481.4-201ENST00000583164 216 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 SNRPGP15-201ENST00000600149 222 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL391646.1-201ENST00000603860 190 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC008277.2-201ENST00000605196 797 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC024941.1-201ENST00000612250 334 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AL357559.1-201ENST00000622228 274 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC019226.1-201ENST00000625666 515 ntBASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.69□□□□□ -1.82
TCRBV7S3A2A0A539 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 Y_RNA.1-201ENST00000352915 104 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-511P-201ENST00000363496 107 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNY1P12-201ENST00000364251 105 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 U3.11-201ENST00000364476 212 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-108P-201ENST00000365558 107 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 CALM2P3-201ENST00000400429 449 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL109755.1-201ENST00000401791 649 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNU2-43P-201ENST00000410306 190 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RNU4-65P-201ENST00000410473 140 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 SNORA57.3-201ENST00000411095 141 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 EI24P1-201ENST00000416584 867 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 ELOCP4-201ENST00000420090 333 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC245054.1-201ENST00000420944 258 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC069157.1-201ENST00000421749 137 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC007283.2-201ENST00000424739 197 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 FCF1P1-201ENST00000432690 571 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC002486.1-201ENST00000435098 391 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC005094.1-201ENST00000440420 368 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL121871.1-201ENST00000443413 436 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC013267.1-201ENST00000458227 267 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AL133162.1-201ENST00000463228 453 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms