Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNU6-253P-201ENST00000384730 105 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC099677.1-201ENST00000420575 175 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC010881.1-201ENST00000433830 235 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 UBE2FP3-201ENST00000436366 524 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 NDUFB4P6-201ENST00000436819 366 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 PNPLA4P1-201ENST00000458328 305 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC097493.1-201ENST00000463958 372 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 RPL38P4-201ENST00000502376 214 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC008549.1-201ENST00000512900 643 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC104057.1-201ENST00000515547 497 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC090888.1-201ENST00000561335 1141 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC068313.1-201ENST00000604028 1008 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC013468.1-201ENST00000608680 598 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AP005137.2-201ENST00000609238 400 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC005332.10-201ENST00000612725 619 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AC079395.3-201ENST00000615161 484 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 ZNF658B-202ENST00000615961 3375 ntBASIC1.41□□□□□ -2.18
TRAV12-3A0A0B4J271 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
TRAV12-3A0A0B4J271 KPNA2P1-201ENST00000458289 1591 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 HMGB1P5-201ENST00000255320 642 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORA16B-201ENST00000364674 135 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 RSL24D1P4-201ENST00000400938 484 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORD23.1-201ENST00000408212 104 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC010385.1-201ENST00000412374 256 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 RPS3AP9-201ENST00000417027 792 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AL139413.1-201ENST00000421309 217 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 EZH2P1-201ENST00000431167 291 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AL451074.3-201ENST00000437709 472 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 DNAJC19P8-201ENST00000452887 259 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 BX248409.1-201ENST00000455497 255 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC106872.3-201ENST00000495104 446 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC118942.1-201ENST00000529674 1035 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AL442163.2-201ENST00000553912 710 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 MIR3616-201ENST00000584070 92 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 MTND2P41-201ENST00000637599 773 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 AL022578.1-201ENST00000439330 1433 ntBASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV12-3A0A0B4J271 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORA16.1-201ENST00000364597 132 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 RNU6-673P-201ENST00000365084 104 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 Y_RNA.500-201ENST00000384466 111 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 RNU6-821P-201ENST00000390995 107 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORA46.1-201ENST00000391069 153 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 SUMO2P12-201ENST00000405924 140 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 NPM1P11-201ENST00000417106 855 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL445685.2-201ENST00000422551 342 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL358075.3-201ENST00000426289 226 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 ARPC3P1-201ENST00000437218 533 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC004022.1-201ENST00000447766 1066 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC087588.1-201ENST00000462203 316 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC025459.1-201ENST00000504072 156 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC096571.1-202ENST00000506634 735 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AC119751.5-201ENST00000514077 770 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORA70.16-201ENST00000516390 95 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 SNORA31.18-201ENST00000517043 134 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 ATP5F1P5-201ENST00000526403 760 ntBASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.39□□□□□ -2.19
TRAV12-3A0A0B4J271 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms