Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC022336.2-201ENST00000568966 2538 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC009812.4-201ENST00000569134 1805 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 MTND5P10-201ENST00000603719 1809 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-263P-201ENST00000363811 107 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6-167P-201ENST00000384292 106 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 UBE2V1P13-201ENST00000436983 439 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC078857.1-201ENST00000469870 667 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC011352.3-201ENST00000505162 593 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 SLC25A15P5-201ENST00000508033 253 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC096745.1-201ENST00000509945 370 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 OR5BM1P-201ENST00000512021 366 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC008549.1-201ENST00000512900 643 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 OR10V3P-201ENST00000525712 725 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 OR1M4P-201ENST00000589199 287 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 U6.48-201ENST00000618523 106 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AL360181.4-201ENST00000621752 134 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 AC110994.2-201ENST00000635481 492 ntBASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.34□□□□□ -2.19
TRAV1-2A0A0B4J238 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV1-2A0A0B4J238 MTND5P28-201ENST00000438005 1594 ntBASIC1.34□□□□□ -2.2
TRAV1-2A0A0B4J238 AC008669.1-201ENST00000565823 2178 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR17-201ENST00000385012 84 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC068050.1-201ENST00000394891 380 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 GSTA9P-201ENST00000406231 611 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 RN7SKP192-201ENST00000411291 327 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 SMC4P1-201ENST00000414479 527 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AL445687.1-201ENST00000439946 251 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 RPL7P36-201ENST00000444633 681 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 SNRPGP6-201ENST00000451124 220 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC010099.1-201ENST00000455434 375 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 FAM172BP-201ENST00000487497 1089 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 RPS15AP34-201ENST00000487776 387 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 TRAV28-201ENST00000557548 323 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC010546.1-201ENST00000569391 485 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR4672-201ENST00000583126 81 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC002487.1-201ENST00000604565 994 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 IGHVIII-44-202ENST00000636235 289 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC123912.3-201ENST00000600907 1367 ntBASIC1.33□□□□□ -2.2
TRAV1-2A0A0B4J238 AC009902.3-201ENST00000606235 2172 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 CDC27P3-201ENST00000635418 1910 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 NUP58P1-201ENST00000502546 1738 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 ELF2P3-201ENST00000445099 1506 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 RNA5SP27-201ENST00000363839 119 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-253P-201ENST00000384730 105 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR583-201ENST00000384846 75 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR676-201ENST00000390702 67 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 SNORA40.18-201ENST00000391200 128 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL122016.1-201ENST00000403365 367 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU6-1140P-201ENST00000410517 106 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 RNU4-78P-201ENST00000410940 126 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC074117.2-201ENST00000417130 397 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL358453.1-201ENST00000422522 250 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL034418.1-201ENST00000448675 860 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL359385.1-201ENST00000456509 365 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AMD1P1-201ENST00000457220 922 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 FO393415.2-201ENST00000480085 343 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC113398.2-201ENST00000507630 558 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC002456.2-201ENST00000509356 380 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC008562.1-201ENST00000521763 330 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AP005597.4-201ENST00000526762 229 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC004923.2-201ENST00000529649 369 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL354943.1-201ENST00000572103 781 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AL669831.4-202ENST00000590817 238 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC016252.1-201ENST00000609721 474 ntBASIC1.32□□□□□ -2.2
TRAV1-2A0A0B4J238 AC103710.2-201ENST00000609912 942 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms