Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC090425.1-201ENST00000610007 140 ntBASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC125257.1-201ENST00000560400 2930 ntBASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TNFRSF11AQ9Y6Q6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 Y_RNA.47-201ENST00000362697 108 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNVU1-3-201ENST00000364313 161 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 U3.29-201ENST00000391296 212 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL356387.2-201ENST00000422272 243 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RPS12P10-201ENST00000427031 377 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 CECR9-201ENST00000453421 199 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 SCARNA18-201ENST00000459004 134 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC053481.1-201ENST00000467217 306 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RPL23AP55-201ENST00000498163 452 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 HMGB1P21-201ENST00000502313 581 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC074050.1-201ENST00000563247 211 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC106782.4-201ENST00000568264 210 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC174048.1-201ENST00000603389 144 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL356218.2-201ENST00000605264 187 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 PISRT1.1-201ENST00000616930 107 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC005086.4-201ENST00000623065 213 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL669831.3-213ENST00000636676 183 ntBASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 ZNF33CP-201ENST00000432492 2030 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 XIAPP3-201ENST00000312918 795 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNU6-550P-201ENST00000391057 101 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MIR450B-201ENST00000401182 78 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 Z98949.2-201ENST00000440996 144 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC239809.1-201ENST00000450470 217 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC128713.1-201ENST00000471495 306 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL133271.1-201ENST00000538229 291 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 GNAI2P1-201ENST00000541815 315 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MIR4293-201ENST00000584305 78 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC010201.1-201ENST00000605051 540 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 U2.17-201ENST00000611454 95 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC004696.1-201ENST00000614345 607 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC139769.1-204ENST00000472297 1931 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC025031.4-201ENST00000621248 3271 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC005332.5-201ENST00000591222 2919 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 Z95114.1-201ENST00000624264 14574 ntBASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TNFRSF11AQ9Y6Q6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 MIR331-201ENST00000362302 94 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNU6-562P-201ENST00000362731 107 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNU6-1252P-201ENST00000363054 104 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNU6-637P-201ENST00000384050 107 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RNU6-603P-201ENST00000411403 107 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC114491.1-201ENST00000416095 246 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RPL12P34-201ENST00000424532 479 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC093151.1-201ENST00000427711 313 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RPL7P28-201ENST00000437739 740 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC104058.1-201ENST00000448028 297 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AL445433.1-201ENST00000457507 257 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 RN7SL481P-201ENST00000477764 299 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC116655.1-201ENST00000508324 901 ntBASIC5.49□□□□□ -1.53
TNFRSF11AQ9Y6Q6 AC116337.1-201ENST00000509680 687 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms