Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA4Q9Y5G9 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AOX3P-204ENST00000491025 2107 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 Y_RNA.172-201ENST00000363765 102 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 MIR32-201ENST00000384965 70 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 RPL21P67-201ENST00000402896 478 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 RNU6-1025P-201ENST00000410629 104 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 ELOCP19-201ENST00000411919 318 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 MRPL48P1-201ENST00000445390 636 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AC005042.3-201ENST00000453230 174 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 snoU13.29-201ENST00000459370 104 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 SNRPCP2-201ENST00000504370 475 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AC005176.2-201ENST00000596933 147 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AC234771.5-201ENST00000600161 514 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 THAP12P9-201ENST00000503971 2360 ntBASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PCDHGA4Q9Y5G9 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU4-80P-201ENST00000363200 141 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RN7SKP275-201ENST00000364626 301 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU1-84P-201ENST00000365447 164 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU6-213P-201ENST00000384051 104 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 MIR153-2-201ENST00000385225 87 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 SNORA77.2-201ENST00000408571 112 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU2-43P-201ENST00000410306 190 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RPL7AP25-201ENST00000423357 805 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 BTF3P11-201ENST00000426582 477 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 Z82210.1-201ENST00000440037 231 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 KNOP1P3-201ENST00000446933 426 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 IGKV3D-34-201ENST00000522638 302 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 RN7SL208P-201ENST00000577964 296 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AP005403.1-201ENST00000579720 229 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AL138895.2-201ENST00000603019 178 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 AC007938.2-201ENST00000604666 2634 ntBASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
PCDHGA4Q9Y5G9 SMG1P5-202ENST00000529428 4219 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 SMG1P2-201ENST00000566127 4221 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 DNM1P47-203ENST00000571780 12667 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU6-1272P-201ENST00000362776 107 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 SNORD14B-201ENST00000364533 90 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU6-968P-201ENST00000384076 107 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 GCNT1P4-201ENST00000404096 329 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RPS12P23-201ENST00000419579 400 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 CYCSP52-201ENST00000422857 310 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RN7SL254P-201ENST00000460609 284 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 DUTP1-201ENST00000493631 470 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 GMPSP1-201ENST00000514075 579 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU6-377P-201ENST00000515965 102 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 RNU6-927P-201ENST00000516199 100 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 EIF4A2P5-201ENST00000529914 499 ntBASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA4Q9Y5G9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms