Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL138752.1-201ENST00000452964 351 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 BX276092.8-201ENST00000455722 250 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 RPL9P9-202ENST00000466501 579 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC067942.3-201ENST00000512025 362 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 GMPSP1-201ENST00000514075 579 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 MIR892C-201ENST00000516410 77 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 MTND5P9-201ENST00000503854 1755 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-249P-201ENST00000363016 102 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 SNORA58B-201ENST00000364259 136 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 MIR223-201ENST00000385204 110 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-882P-201ENST00000391025 103 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 EI24P1-201ENST00000416584 867 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AL096701.2-201ENST00000416920 238 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AL354766.1-201ENST00000423396 542 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC004938.1-201ENST00000438468 308 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 RN7SL51P-201ENST00000468230 285 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC100832.1-201ENST00000471945 383 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 RPL30P10-201ENST00000488148 337 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC022493.1-201ENST00000492984 337 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC074250.1-201ENST00000511117 192 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 APOOP4-201ENST00000513530 597 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 BNIP3P5-201ENST00000562290 498 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 BX284668.6-201ENST00000606899 438 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 MIR6798-201ENST00000612887 67 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 Z99571.1-201ENST00000636677 394 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHB11Q9Y5F2 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AL451142.2-201ENST00000429076 2090 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.65-201ENST00000362846 100 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 snoU2_19.2-201ENST00000363024 80 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 SNORD81.1-201ENST00000363064 77 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RNU1-136P-201ENST00000384181 164 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.458-201ENST00000384240 102 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.464-201ENST00000384282 110 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 PCNPP3-201ENST00000393579 471 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC009804.1-201ENST00000400949 179 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AL592045.1-201ENST00000429867 352 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC099670.2-201ENST00000435130 321 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RPS23P5-201ENST00000495419 428 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-927P-201ENST00000516199 100 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.713-201ENST00000517013 96 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-1315P-201ENST00000517187 99 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 DEFB108E-201ENST00000524692 240 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC022884.2-201ENST00000578535 580 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 MIR8080-201ENST00000622224 89 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AC127459.3-201ENST00000624328 466 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms