Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB4Q9Y5E5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB4Q9Y5E5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB4Q9Y5E5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PCDHB4Q9Y5E5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB4Q9Y5E5 ZNF734P-201ENST00000419494 1534 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 OR5P1P-201ENST00000299512 925 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 U3.12-201ENST00000364498 214 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 SNORD51-201ENST00000384320 80 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 Y_RNA.579-201ENST00000390939 94 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC097374.1-203ENST00000400783 485 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 RPS4XP9-201ENST00000405151 780 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 MIR548P-201ENST00000408336 84 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 OR6C66P-201ENST00000414917 930 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC015795.1-201ENST00000513669 327 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC005798.1-201ENST00000513715 387 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 RN7SKP277-201ENST00000516895 283 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-64P-201ENST00000517119 105 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 CDH12P4-201ENST00000517835 295 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 CDH12P3-201ENST00000517935 295 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 CDH12P1-201ENST00000518435 295 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AP001804.3-201ENST00000525146 880 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AL352979.3-201ENST00000553515 247 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AL118558.2-201ENST00000556294 238 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 FRG2DP-202ENST00000566967 323 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC012182.1-201ENST00000570133 895 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 POLR3GP2-201ENST00000588366 668 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AL022099.1-201ENST00000604551 712 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AP000942.4-201ENST00000604811 241 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 CTHRC1P1-201ENST00000605383 469 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 AC134503.1-201ENST00000633048 54 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 PHKBP1-201ENST00000450951 1951 ntBASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB4Q9Y5E5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 IQCB2P-201ENST00000401788 1633 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-43P-201ENST00000384302 107 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-339P-201ENST00000384310 107 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AL359634.1-202ENST00000404721 284 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 HMGB3P11-201ENST00000440127 604 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 PRPS1P1-201ENST00000445305 876 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 PHBP16-201ENST00000446318 950 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 RNU7-66P-201ENST00000459469 62 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 RN7SL459P-201ENST00000481078 302 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 KLHL2P1-201ENST00000508691 521 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-559P-201ENST00000516151 98 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 IGKV2D-36-201ENST00000518643 226 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 FAM60DP-201ENST00000524174 632 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC109635.4-202ENST00000531666 412 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 MIR3171-201ENST00000584270 74 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AL021997.2-201ENST00000615674 271 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 uc_338.13-201ENST00000618243 179 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 AC011155.2-201ENST00000623202 216 ntBASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB4Q9Y5E5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms