Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DNAJC19P3-201ENST00000594491 331 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 BNIP3P4-201ENST00000604946 565 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC091925.2-201ENST00000625059 256 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 MTCO1P6-201ENST00000481192 1384 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC012321.1-201ENST00000561622 1588 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AL022578.1-201ENST00000439330 1433 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RNA5SP289-201ENST00000362332 137 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 MIR525-201ENST00000384978 85 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AL589655.1-201ENST00000405398 482 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RNU6-77P-201ENST00000410554 91 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 MRPS36P2-201ENST00000512569 299 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 IGJP1-201ENST00000522682 475 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AP003122.3-201ENST00000526316 255 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 ZNF705CP-201ENST00000530515 889 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 PRELID2P1-201ENST00000552837 301 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 SNORD39.3-201ENST00000584451 71 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC079791.1-201ENST00000605356 973 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC097504.2-201ENST00000608088 454 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC107294.1-201ENST00000609524 467 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 AC073569.3-201ENST00000619055 682 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS29Q9UBQ0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 SNORD115-48-201ENST00000364764 76 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 U3.20-201ENST00000390909 217 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 RNU6-882P-201ENST00000391025 103 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 Z75741.2-201ENST00000417272 1167 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 ZNF965P-201ENST00000432501 817 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC090774.1-201ENST00000435925 246 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 RNU7-26P-201ENST00000458980 63 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AL049714.1-201ENST00000466686 347 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC104164.3-201ENST00000467363 1258 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 MTND4LP3-201ENST00000468320 276 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 FAM172BP-201ENST00000487497 1089 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 RPL23AP49-201ENST00000492925 468 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 GZMAP1-201ENST00000503054 631 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC103783.1-201ENST00000520506 373 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 VN1R78P-201ENST00000597393 564 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC112503.2-201ENST00000609005 552 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AP005137.2-201ENST00000609238 400 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC079395.3-201ENST00000615161 484 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AC093591.3-201ENST00000634516 308 ntBASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VPS29Q9UBQ0 RNU6-525P-201ENST00000363685 104 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 SNORA68.1-201ENST00000364537 132 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC005005.2-201ENST00000420779 380 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AL358075.3-201ENST00000426289 226 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC093422.3-201ENST00000428506 305 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 UBE2V1P13-201ENST00000436983 439 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 RPL23AP16-201ENST00000441715 421 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 RAC1P7-201ENST00000445367 377 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 MTCYBP3-201ENST00000445588 1137 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 RPS15AP27-201ENST00000449183 343 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC109486.1-201ENST00000486833 374 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC147055.4-201ENST00000504399 745 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AL359273.1-201ENST00000510918 627 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms