Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 VDAC1P9-201ENST00000412766 841 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 BEND7P1-201ENST00000422058 457 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC005517.2-201ENST00000424673 553 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL23AP1-201ENST00000428990 471 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL21P91-201ENST00000429231 479 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC016712.1-201ENST00000431088 378 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL23AP93-201ENST00000440847 484 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 MTCYBP6-201ENST00000441810 138 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL23AP43-201ENST00000446445 471 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL29P29-201ENST00000448725 423 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPS29P33-201ENST00000456717 146 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPS15AP36-201ENST00000492022 382 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP446-201ENST00000515955 82 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RPL7P20-201ENST00000520308 745 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC084783.1-201ENST00000565846 910 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 MIR4330-201ENST00000579077 105 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC091178.1-203ENST00000584586 279 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC022432.1-201ENST00000595739 310 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 BPIFA4P-203ENST00000603168 689 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.6-201ENST00000603753 252 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.11-201ENST00000604059 253 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC008162.1-201ENST00000604718 254 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.1-201ENST00000604752 252 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.5-201ENST00000605253 252 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.12-201ENST00000605291 253 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.8-201ENST00000605353 252 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL670379.7-201ENST00000605823 252 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL133255.1-201ENST00000606374 441 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 C2orf27A-204ENST00000623058 969 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC011155.2-201ENST00000623202 216 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC025034.2-201ENST00000623264 286 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC103710.2-202ENST00000641454 2853 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 GABPAP-201ENST00000419271 1356 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-82P-201ENST00000363970 107 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.326-201ENST00000365176 113 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 MIR129-1-201ENST00000384972 72 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AL592114.1-201ENST00000403842 483 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AL359634.1-202ENST00000404721 284 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AL391219.1-201ENST00000422570 483 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 RPL21P133-201ENST00000443666 476 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AL118520.1-201ENST00000450770 291 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC234775.1-201ENST00000454247 670 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 PPP1R2P5-201ENST00000457256 603 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SL432P-201ENST00000484057 298 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 MTND4P7-201ENST00000523876 130 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC024619.4-201ENST00000580924 316 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 MIR6820-201ENST00000611508 62 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 SNHG22-203ENST00000617833 660 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AP000346.3-201ENST00000622821 210 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms