Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 HMGB1P5-201ENST00000255320 642 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 RPL9P7-201ENST00000330965 580 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AL451074.5-201ENST00000415894 435 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 RPLP0P7-201ENST00000416050 667 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 PTP4A1P7-201ENST00000423476 514 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AL390023.1-201ENST00000428836 262 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AL513185.3-201ENST00000433335 1300 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 OR6K5P-201ENST00000447050 945 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 HMGN1P5-201ENST00000448591 263 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC084024.2-201ENST00000503480 791 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC008837.1-201ENST00000511513 412 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 UBTFL10-201ENST00000528532 562 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AP001317.1-201ENST00000531194 960 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 MTCYBP27-201ENST00000555160 670 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC008669.1-201ENST00000565823 2178 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 MIR3124-201ENST00000582636 67 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 MIR3609-201ENST00000582661 80 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 DNAJC19P3-201ENST00000594491 331 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AP002826.1-201ENST00000608835 315 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AL161629.2-201ENST00000615347 275 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AP003485.1-201ENST00000625093 753 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AC126544.2-201ENST00000625174 749 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 AL355596.1-201ENST00000565399 3996 ntBASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXC10Q9NYD6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AL161431.1-201ENST00000618966 4205 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 SNORA51.6-201ENST00000384151 125 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 LUZP4P1-201ENST00000415420 344 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC092634.6-201ENST00000418558 192 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 RAC1P8-201ENST00000427086 527 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 MTCYBP42-201ENST00000444653 1130 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC009961.3-201ENST00000449832 765 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 SNRPGP6-201ENST00000451124 220 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 NDUFA5P7-201ENST00000452914 242 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC008427.1-201ENST00000503102 655 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 SNORA9.3-201ENST00000516383 129 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 RPL7P20-201ENST00000520308 745 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 MTCO3P15-201ENST00000526563 574 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 DEFB130C-202ENST00000530001 230 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC044913.1-201ENST00000557200 430 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC024560.3-201ENST00000608482 349 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AL512427.1-201ENST00000618593 349 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 CTSLP2-204ENST00000629029 392 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 AC087821.2-201ENST00000637086 450 ntBASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HOXC10Q9NYD6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 XGY1-201ENST00000381172 446 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AL079342.2-201ENST00000403367 482 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AL133264.1-201ENST00000407157 562 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 RNF2P1-201ENST00000442955 1010 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC234775.1-201ENST00000454247 670 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 RNU6-1028P-201ENST00000517164 93 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AL512310.1-201ENST00000548639 172 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC055876.1-202ENST00000567053 138 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC104072.1-201ENST00000568817 668 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 GAS5-AS1-201ENST00000602767 694 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 HSPE1P7-201ENST00000604681 321 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC093673.2-201ENST00000609674 331 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC010975.3-201ENST00000618727 978 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AP003476.1-201ENST00000623984 516 ntBASIC3.04□□□□□ -1.92
HOXC10Q9NYD6 AC010872.1-201ENST00000624225 675 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms