Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AP000567.1-201ENST00000406413 156 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 RNA5SP44-201ENST00000410446 133 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC007390.1-201ENST00000415722 356 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 SETP8-201ENST00000435341 628 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 RPS29P31-201ENST00000446147 164 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 RPS24P6-201ENST00000452670 400 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC234775.1-201ENST00000454247 670 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 SNRPGP9-201ENST00000456025 225 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 snoU13.24-201ENST00000458998 104 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 FCF1P3-201ENST00000496394 590 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 MTCO2P32-201ENST00000514865 403 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 RN7SKP289-201ENST00000517244 295 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC012065.4-201ENST00000602445 679 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC112187.2-201ENST00000604345 283 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL022099.1-201ENST00000604551 712 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC012360.2-201ENST00000609349 391 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 MIR8058-201ENST00000615737 89 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC112204.3-201ENST00000623822 332 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AL049781.1-201ENST00000623195 3585 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 AC093908.1-201ENST00000623125 8092 ntBASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SPHK1Q9NYA1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC032011.1-201ENST00000611703 1549 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 MIR208A-201ENST00000362287 71 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 SNORD46.1-201ENST00000364139 104 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 U3.20-201ENST00000390909 217 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AL136116.1-201ENST00000403591 381 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RN7SKP142-201ENST00000411236 328 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 HMGN2P16-201ENST00000456802 261 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RPL21P10-201ENST00000463521 490 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 MLLT10P2-201ENST00000506434 249 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 Y_RNA.695-201ENST00000516715 107 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 SYF2P1-201ENST00000550658 413 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 MIR5697-201ENST00000578045 78 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 FAM60BP-201ENST00000578364 658 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC083760.1-201ENST00000589621 670 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AL158211.4-201ENST00000606988 584 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC135507.1-201ENST00000607214 561 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 AL158063.1-201ENST00000615349 536 ntBASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.3□□□□□ -1.88
SPHK1Q9NYA1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.29□□□□□ -1.88
SPHK1Q9NYA1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SPHK1Q9NYA1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms