Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-928P-201ENST00000516876 104 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 SLC2A13P1-201ENST00000531560 322 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 HIGD1AP17-201ENST00000554576 276 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL022067.1-201ENST00000602426 454 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC024153.1-201ENST00000603103 365 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 YPEL5P2-201ENST00000605553 359 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC008443.7-201ENST00000622195 246 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC073308.1-201ENST00000623696 305 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC005539.1-201ENST00000443768 1479 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 RNU6-1122P-201ENST00000384449 107 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 ATP5F1P3-201ENST00000397213 657 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AL031679.1-201ENST00000400616 525 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC069282.1-201ENST00000411911 526 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MRPS36P1-201ENST00000421291 307 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MTCO2P5-201ENST00000422621 426 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MTND2P20-201ENST00000440805 661 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC027673.1-201ENST00000456245 405 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MTND4LP3-201ENST00000468320 276 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MTCO1P47-201ENST00000523889 1271 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC123904.3-201ENST00000547218 814 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AMZ2P1-203ENST00000565833 850 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 HMGB1P6-201ENST00000569046 646 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AP001429.1-201ENST00000602568 530 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC013553.2-201ENST00000604244 589 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AL137843.1-201ENST00000605078 385 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC245389.1-201ENST00000605141 529 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AL590099.1-201ENST00000615276 138 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC090132.2-201ENST00000615881 347 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AC012314.7-201ENST00000619693 93 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AP003476.1-201ENST00000623984 516 ntBASIC2.43□□□□□ -2.02
CLN6Q9NWW5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLN6Q9NWW5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RNU6-224P-201ENST00000384055 107 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 MIR325-201ENST00000385260 98 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC096533.1-201ENST00000411645 353 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL139421.1-201ENST00000423010 169 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 NDUFB4P7-201ENST00000423198 363 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL365496.1-201ENST00000426885 215 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL512844.2-201ENST00000433990 593 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC112220.1-201ENST00000434628 355 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RPL23AP20-201ENST00000447965 421 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 TRGVB-201ENST00000453257 471 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 MTND2P24-201ENST00000453434 806 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 SNORA84-201ENST00000459229 133 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC126182.1-201ENST00000478134 357 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC108734.3-201ENST00000481241 1165 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AP001025.2-201ENST00000490908 477 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL358832.1-201ENST00000497800 389 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 HMGB1P28-201ENST00000507778 552 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC074250.1-201ENST00000511117 192 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 TTC39CP1-201ENST00000512513 755 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC093677.1-201ENST00000514414 678 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RNU6-528P-201ENST00000516926 100 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RN7SKP57-201ENST00000517248 293 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 HMGB1P41-201ENST00000520234 440 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms