Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.62□□□□□ -1.83
LIN7CQ9NUP9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL133383.2-201ENST00000622958 2336 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC008568.2-201ENST00000623862 2313 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 SNORA62.1-201ENST00000364287 154 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 RNU4-48P-201ENST00000365559 182 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 MIR129-1-201ENST00000384972 72 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 MIR93-201ENST00000385024 80 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 MIR454-201ENST00000390180 115 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL591416.1-201ENST00000404015 867 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 U3.42-201ENST00000408746 214 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 ELOCP14-201ENST00000428070 331 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL356867.1-201ENST00000429623 299 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 ELOCP7-201ENST00000439968 331 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL353748.1-201ENST00000440753 474 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC003071.1-201ENST00000451219 789 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC079804.1-201ENST00000461922 436 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 MRPS17P3-201ENST00000465453 385 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC111000.3-201ENST00000508057 576 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC017037.1-201ENST00000508460 471 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC090281.1-201ENST00000523019 276 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AP001804.3-201ENST00000525146 880 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AP000827.1-201ENST00000527814 258 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC104383.1-201ENST00000530297 370 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 OR5AL2P-201ENST00000532185 920 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL352979.3-201ENST00000553515 247 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC103858.2-201ENST00000621471 543 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 AC007998.5-201ENST00000622938 237 ntBASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIN7CQ9NUP9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-179P-201ENST00000363350 107 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-1090P-201ENST00000364065 94 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 SNORD74.4-201ENST00000364129 80 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP505-201ENST00000364748 108 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-483P-201ENST00000384088 108 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 Y_RNA.450-201ENST00000384198 113 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 Y_RNA.481-201ENST00000384373 102 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-606P-201ENST00000384721 111 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-1158P-201ENST00000391167 107 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 JKAMPP1-201ENST00000413804 919 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 OR51A5P-201ENST00000415429 942 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 MRPL50P2-201ENST00000416821 482 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL606489.2-201ENST00000433886 234 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL132765.1-201ENST00000434165 553 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RPL36AP6-201ENST00000435770 321 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 FDX1P2-201ENST00000450769 375 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RN7SL738P-201ENST00000470264 297 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC108078.2-201ENST00000510750 236 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 SNORA31.3-201ENST00000516029 96 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-927P-201ENST00000516199 100 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP73-201ENST00000516744 108 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RNU6-352P-201ENST00000516908 107 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms