Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MIR670-201ENST00000390142 98 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 RN7SKP32-201ENST00000410167 303 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 RN7SKP101-201ENST00000411376 320 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 VN1R36P-201ENST00000414936 291 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 RPL23AP39-201ENST00000415533 405 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AIMP1P2-201ENST00000425294 312 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC027575.1-201ENST00000481064 460 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC107398.1-201ENST00000486904 505 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC023141.11-201ENST00000508864 202 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC008885.2-201ENST00000509506 930 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 SNORA31.13-201ENST00000516624 135 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 MTND2P26-201ENST00000528255 1029 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 OR5AL2P-201ENST00000532185 920 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 GTF2IP8-201ENST00000560687 584 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC084373.1-201ENST00000603311 235 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 AC079395.3-201ENST00000615161 484 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 MIR6075-201ENST00000620782 95 ntBASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMCO4Q9NRQ5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 RNA5SP289-201ENST00000362332 137 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 SNORA71.3-201ENST00000362582 128 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 RNU1-105P-201ENST00000363470 161 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AL023284.1-201ENST00000403956 276 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AL024474.1-201ENST00000404655 591 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 RPS3AP24-201ENST00000407896 734 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AL445646.1-201ENST00000431784 216 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AC097462.2-201ENST00000504623 481 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 CYCSP2-201ENST00000558168 301 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AC009063.1-201ENST00000563342 702 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 AL359535.1-201ENST00000612100 1087 ntBASIC1.21□□□□□ -2.22
SMCO4Q9NRQ5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AL031679.1-201ENST00000400616 525 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AL356057.1-202ENST00000402263 756 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 RNU4-53P-201ENST00000410828 140 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AC126389.1-201ENST00000477436 290 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AP001960.1-201ENST00000506494 658 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AC115085.1-201ENST00000588924 229 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
SMCO4Q9NRQ5 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 MIR1250-201ENST00000408098 113 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 MIR1294-201ENST00000408503 142 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC244453.4-201ENST00000419150 388 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC246680.2-201ENST00000422106 389 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 RPS3AP44-201ENST00000425466 790 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 SGO1P2-201ENST00000429458 1589 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AL356320.1-201ENST00000429616 163 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC244035.1-201ENST00000430042 390 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AL031663.1-201ENST00000437445 219 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 RPS3AP14-201ENST00000483907 780 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AP001804.3-201ENST00000525146 880 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 LINC00933-203ENST00000559812 219 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC013444.2-201ENST00000603317 787 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AP003485.2-201ENST00000623636 610 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 ZNF702P-202ENST00000434269 1966 ntBASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.19□□□□□ -2.22
SMCO4Q9NRQ5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 RN7SKP226-201ENST00000364912 300 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 SNORA64-201ENST00000384674 134 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 MCTS2P-201ENST00000394552 546 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL358075.3-201ENST00000426289 226 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL445669.1-201ENST00000426743 755 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms