Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC091965.2-201ENST00000512324 613 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC093677.1-201ENST00000514414 678 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 IGKV2D-36-201ENST00000518643 226 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC013828.2-201ENST00000532487 235 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC007115.1-201ENST00000546853 234 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC128687.1-201ENST00000605304 619 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC097468.3-201ENST00000607956 456 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC103710.4-201ENST00000609301 899 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 uc_338.1-201ENST00000612113 180 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 HULC.1-201ENST00000612720 240 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AC025594.3-201ENST00000613068 790 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 AL157817.1-201ENST00000614264 790 ntBASIC3.84□□□□□ -1.79
DDX4Q9NQI0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
DDX4Q9NQI0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
DDX4Q9NQI0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
DDX4Q9NQI0 AC092447.10-201ENST00000620607 1652 ntBASIC3.84□□□□□ -1.8
DDX4Q9NQI0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 Y_RNA.436-201ENST00000384097 102 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 U8.14-201ENST00000390843 143 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 RNU6-821P-201ENST00000390995 107 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 RN7SKP142-201ENST00000411236 328 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC244098.2-201ENST00000422068 99 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC007742.1-201ENST00000425789 329 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 EZH2P1-201ENST00000431167 291 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 ELOCP26-201ENST00000436067 329 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 RSU1P2-202ENST00000437884 485 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 OR6K1P-201ENST00000456766 971 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 snoU109.4-201ENST00000458953 143 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC068724.1-201ENST00000487100 792 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AP001025.2-201ENST00000490908 477 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC034222.1-201ENST00000494052 532 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 RPL23AP55-201ENST00000498163 452 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC034159.1-201ENST00000513885 583 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC008885.1-201ENST00000514930 301 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC107934.2-201ENST00000518653 310 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC060788.1-201ENST00000521318 469 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC024224.1-201ENST00000538284 609 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 MIR544B-201ENST00000582372 78 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 UBL5P2-201ENST00000583788 219 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 IGHV3-29-201ENST00000604817 344 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC006023.2-201ENST00000609916 167 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 SNORD39.4-201ENST00000620099 78 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 AC090582.1-201ENST00000636321 199 ntBASIC3.83□□□□□ -1.8
DDX4Q9NQI0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
DDX4Q9NQI0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX4Q9NQI0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
DDX4Q9NQI0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DDX4Q9NQI0 FGF7P2-201ENST00000332473 296 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 Y_RNA.97-201ENST00000363094 102 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RNU6-343P-201ENST00000364709 104 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RNU6-744P-201ENST00000365557 107 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RNU6-1316P-201ENST00000384242 108 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 SNORA54-201ENST00000384281 123 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 SNORD51-201ENST00000384320 80 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 SNORA44-201ENST00000384584 132 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RNY3P10-201ENST00000384764 102 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
DDX4Q9NQI0 AL138880.1-201ENST00000405824 642 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RNA5SP56-201ENST00000410277 118 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RPS7P13-201ENST00000413955 498 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 AC006548.1-201ENST00000427470 102 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 RPL23AP82-202ENST00000427528 469 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 BX890604.2-201ENST00000427883 474 ntBASIC3.82□□□□□ -1.8
DDX4Q9NQI0 AL158071.1-201ENST00000430315 461 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms