Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
ZFYVE28Q9HCC9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZFYVE28Q9HCC9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
ZFYVE28Q9HCC9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ZFYVE28Q9HCC9 AC116667.1-201ENST00000604855 2072 ntBASIC5.46□□□□□ -1.53
ZFYVE28Q9HCC9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RNU1-94P-201ENST00000362627 173 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RNU6-593P-201ENST00000364716 112 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC019155.1-201ENST00000382242 574 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RNU6-946P-201ENST00000383878 107 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RNU6-821P-201ENST00000390995 107 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AL391417.1-201ENST00000404100 426 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 CYCSP10-201ENST00000417973 294 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 PSMA2P3-201ENST00000429685 675 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RPL21P112-201ENST00000434403 463 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AL035666.1-201ENST00000446195 348 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 H2AFZP5-201ENST00000446960 382 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC007967.1-201ENST00000455422 1159 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC008526.1-201ENST00000509149 338 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 MRPL49P2-201ENST00000521066 465 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 IPO5P1-202ENST00000600039 287 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC006254.3-201ENST00000603353 884 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 U2.17-201ENST00000611454 95 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AL138726.1-201ENST00000614873 333 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AL445567.2-201ENST00000618935 498 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC010378.1-201ENST00000619270 362 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AC098657.3-201ENST00000620434 263 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 OR14L1P-202ENST00000641545 3009 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 DDX10P1-201ENST00000448545 1933 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 MTCO1P24-201ENST00000515438 1558 ntBASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ZFYVE28Q9HCC9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 SAGE2P-201ENST00000420011 2126 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 ZNF519P1-201ENST00000449011 1626 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 Y_RNA.135-201ENST00000363439 95 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 RNU6-310P-201ENST00000384655 107 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 MIR1250-201ENST00000408098 113 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 BX682237.1-201ENST00000415016 335 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 ATG3P1-201ENST00000419507 911 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 RPS29P17-201ENST00000430795 166 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 SNRPEP4-201ENST00000435815 279 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 BTF3P15-201ENST00000455606 336 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC008481.1-201ENST00000463278 396 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC034236.1-201ENST00000469891 373 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 RN7SL558P-201ENST00000497468 299 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC020593.1-201ENST00000507399 299 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 RANP9-201ENST00000519957 271 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 CYCSP29-201ENST00000533731 318 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AL117187.1-201ENST00000555482 181 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 MIR4660-201ENST00000583549 74 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 AC110801.1-201ENST00000623590 212 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 U3.53-201ENST00000628922 216 ntBASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ZFYVE28Q9HCC9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms