Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AL117339.2-201ENST00000430475 180 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 RPL23AP81-201ENST00000455252 467 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 RNU7-182P-201ENST00000459009 62 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC079804.1-201ENST00000461922 436 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 MTND4P17-201ENST00000470444 350 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AF213884.1-201ENST00000488102 463 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC093767.1-201ENST00000504523 156 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC022634.1-201ENST00000520765 532 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC008737.2-201ENST00000599446 118 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 uc_338.15-201ENST00000615470 191 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 AC121333.1-201ENST00000567488 2709 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 MTND5P1-201ENST00000445440 1375 ntBASIC4.78□□□□□ -1.64
BCAS3Q9H6U6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL133243.3-201ENST00000617415 3004 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RNU6-254P-201ENST00000363377 107 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RNU6-511P-201ENST00000363496 107 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.212-201ENST00000364177 102 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RNY3P13-201ENST00000365542 102 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL359837.1-201ENST00000381357 287 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.414-201ENST00000384011 101 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 MIR19A-201ENST00000384878 82 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 MTCYBP4-201ENST00000401524 249 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL358176.2-201ENST00000425769 204 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL031736.2-201ENST00000426573 787 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 PSMA6P3-201ENST00000428242 164 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RPL23AP25-201ENST00000430973 463 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 MTATP6P16-201ENST00000434543 526 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RPL7P52-201ENST00000449200 742 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 MTND1P9-201ENST00000453775 944 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC108059.3-201ENST00000456388 214 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 SNORD121B-201ENST00000458838 81 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RNU7-180P-201ENST00000459240 63 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 snoU109.6-201ENST00000516831 118 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 NARSP2-201ENST00000518524 679 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC090151.1-201ENST00000520784 730 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 OR8R1P-201ENST00000543943 764 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 HMGB2P1-201ENST00000591146 634 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AP001330.4-201ENST00000604350 154 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC080078.3-201ENST00000605407 463 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL121992.2-201ENST00000606262 256 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 7SK.10-201ENST00000621414 298 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AC112484.5-201ENST00000624189 228 ntBASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.77□□□□□ -1.65
BCAS3Q9H6U6 AP004289.2-201ENST00000444413 1457 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC067945.1-201ENST00000342609 618 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RNU6-249P-201ENST00000363016 102 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RNU5E-8P-201ENST00000363502 116 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.167-201ENST00000363735 109 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.197-201ENST00000364004 102 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms