Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RNU1-94P-201ENST00000362627 173 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RNU6-989P-201ENST00000362756 107 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.197-201ENST00000364004 102 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.395-201ENST00000383945 109 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RNU6-1013P-201ENST00000384180 107 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AL356387.2-201ENST00000422272 243 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RPS12P5-201ENST00000423449 371 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AC021382.1-201ENST00000483523 359 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 COX7A2P2-201ENST00000505291 250 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RN7SKP46-201ENST00000515942 234 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RNU6-864P-201ENST00000516256 108 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RNU6-1088P-201ENST00000516850 104 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 COX6CP5-201ENST00000527162 228 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 SNRPGP18-201ENST00000553000 214 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 RN7SL176P-201ENST00000580352 264 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AL355598.1-201ENST00000604169 202 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AL713922.2-201ENST00000619384 716 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 uc_338.22-201ENST00000622722 187 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 AC011944.2-201ENST00000624440 683 ntBASIC4.75□□□□□ -1.65
RNF38Q9H0F5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF38Q9H0F5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 SCN1A-220ENST00000641603 12506 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC087190.4-201ENST00000574616 8334 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNA5SP258-201ENST00000362750 119 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU6-263P-201ENST00000363811 107 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU5A-8P-201ENST00000364102 114 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.339-201ENST00000365325 102 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU6-1029P-201ENST00000384109 107 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.530-201ENST00000384587 101 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 MIR558-201ENST00000384920 94 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU6-821P-201ENST00000390995 107 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL080315.1-201ENST00000406055 466 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC108734.1-201ENST00000439549 399 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU7-152P-201ENST00000458982 64 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU7-66P-201ENST00000459469 62 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC108145.1-201ENST00000503770 153 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 FTH1P21-201ENST00000512179 511 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU6-1137P-201ENST00000517073 99 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNU4-60P-201ENST00000517239 135 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC063950.1-201ENST00000552036 308 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 MIR4503-201ENST00000582187 83 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL022099.1-201ENST00000604551 712 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL590392.1-201ENST00000604960 446 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC092807.2-201ENST00000609367 243 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 MIR6830-201ENST00000636015 70 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 OR52H1-202ENST00000641796 1061 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL022322.2-201ENST00000624072 20397 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC125257.1-201ENST00000560400 2930 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AC066616.2-201ENST00000559334 1481 ntBASIC4.74□□□□□ -1.65
RNF38Q9H0F5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
RNF38Q9H0F5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC074029.4-201ENST00000624796 1859 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RNA5SP509-201ENST00000364577 119 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.378-201ENST00000365652 113 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RNU6-331P-201ENST00000384724 107 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MIR124-3-201ENST00000384866 87 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms