Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC017083.3-201ENST00000609955 700 ntBASIC3.8□□□□□ -1.8
TRIM2Q9C040 AL391261.4-201ENST00000616012 481 ntBASIC3.8□□□□□ -1.8
TRIM2Q9C040 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM2Q9C040 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRIM2Q9C040 AL645937.1-201ENST00000641739 1652 ntBASIC3.8□□□□□ -1.8
TRIM2Q9C040 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM2Q9C040 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM2Q9C040 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM2Q9C040 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC004520.1-201ENST00000608362 1413 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC138915.3-201ENST00000562908 1389 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNU5E-8P-201ENST00000363502 116 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNY4P14-201ENST00000363656 96 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNU6-629P-201ENST00000384061 103 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNU6-483P-201ENST00000384088 108 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 RPS26P8-201ENST00000393490 348 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 MIR1193-201ENST00000408109 78 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 MIR1277-201ENST00000408536 78 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 SNORA3C-201ENST00000408792 125 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC000111.3-201ENST00000433478 193 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AL353572.1-201ENST00000442490 417 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNA5SP246-201ENST00000458909 119 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 MTCO2P29-201ENST00000465212 189 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC023194.1-201ENST00000493084 308 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 Y_RNA.693-201ENST00000516641 110 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 RNU6-1178P-201ENST00000516674 107 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 DEFB108D-201ENST00000527787 222 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AL512360.1-201ENST00000555346 234 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 IGHV3-29-201ENST00000604817 344 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 Z84480.1-201ENST00000605131 311 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC004908.2-201ENST00000609090 574 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC233309.1-201ENST00000619522 751 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC010733.2-201ENST00000589496 5702 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM2Q9C040 AC090337.1-201ENST00000579651 2074 ntBASIC3.79□□□□□ -1.8
TRIM2Q9C040 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 Y_RNA.303-201ENST00000364998 94 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 Y_RNA.402-201ENST00000383972 102 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 Y_RNA.453-201ENST00000384223 109 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 MIR1-2-201ENST00000384961 85 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 RN7SKP263-201ENST00000411194 309 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 RNU6-516P-201ENST00000411381 104 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 RPS7P15-201ENST00000415804 584 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 MTCO1P20-201ENST00000425366 358 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 TIMM9P3-201ENST00000428659 274 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 BTF3P10-201ENST00000433415 495 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 MTND1P9-201ENST00000453775 944 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM2Q9C040 RNU6-420P-201ENST00000458780 107 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 RNU7-59P-201ENST00000459101 61 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 RPL7P19-201ENST00000469948 618 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 AF213884.1-201ENST00000488102 463 ntBASIC3.78□□□□□ -1.8
TRIM2Q9C040 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM2Q9C040 AC108475.1-201ENST00000507880 950 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms