Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.33□□□□□ -1.88
CDCA3Q99618 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDCA3Q99618 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.33□□□□□ -1.88
CDCA3Q99618 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.33□□□□□ -1.88
CDCA3Q99618 AC034159.1-201ENST00000513885 583 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 RNU2-58P-201ENST00000516403 183 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 MTCYBP41-201ENST00000528913 1123 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.33□□□□□ -1.88
CDCA3Q99618 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDCA3Q99618 AC090615.1-201ENST00000577519 154 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.33□□□□□ -1.88
CDCA3Q99618 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.33□□□□□ -1.88
CDCA3Q99618 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC004853.1-201ENST00000604902 698 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC090186.1-201ENST00000605991 572 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC072039.2-201ENST00000608883 439 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AC122133.1-201ENST00000613964 233 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AL596245.1-201ENST00000618994 362 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 AL603755.1-201ENST00000619504 163 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.33□□□□□ -1.88
CDCA3Q99618 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDCA3Q99618 AL049780.3-201ENST00000624612 1583 ntBASIC3.33□□□□□ -1.88
CDCA3Q99618 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCA3Q99618 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC006504.1-201ENST00000562493 3666 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDCA3Q99618 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 Y_RNA.560-201ENST00000384689 102 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.32□□□□□ -1.88
CDCA3Q99618 RAD23BP2-201ENST00000416003 1207 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.32□□□□□ -1.88
CDCA3Q99618 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCA3Q99618 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC078918.1-201ENST00000498515 228 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.32□□□□□ -1.88
CDCA3Q99618 RPF2P2-201ENST00000504693 896 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.32□□□□□ -1.88
CDCA3Q99618 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCA3Q99618 SETP7-201ENST00000552169 453 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC007954.1-201ENST00000554198 494 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC090888.1-201ENST00000561335 1141 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AL845331.3-202ENST00000562856 261 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC087481.2-201ENST00000565492 330 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 ZNF192P1-203ENST00000565888 810 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.32□□□□□ -1.88
CDCA3Q99618 AC097468.3-201ENST00000607956 456 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC103710.4-201ENST00000609301 899 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC092192.1-201ENST00000633154 1018 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 CRYM-AS1-204ENST00000637983 556 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 AC099063.3-201ENST00000642066 185 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 MTND4P16-201ENST00000466108 1367 ntBASIC3.32□□□□□ -1.88
CDCA3Q99618 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDCA3Q99618 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.32□□□□□ -1.88
CDCA3Q99618 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL161781.1-201ENST00000354277 403 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 MIR449A-201ENST00000362113 91 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 SNORA54-201ENST00000384281 123 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 RNU5A-2P-201ENST00000384337 116 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 EI24P1-201ENST00000416584 867 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL356968.1-201ENST00000416622 474 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.31□□□□□ -1.88
CDCA3Q99618 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.31□□□□□ -1.88
CDCA3Q99618 RPL23AP82-202ENST00000427528 469 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL590103.1-201ENST00000434488 307 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 UBE2FP3-201ENST00000436366 524 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL445567.1-201ENST00000439121 144 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
CDCA3Q99618 snoU13.8-201ENST00000458890 104 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.31□□□□□ -1.88
CDCA3Q99618 AC093809.1-201ENST00000509155 340 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AC010486.1-201ENST00000511793 424 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 SNORA31.20-201ENST00000517111 133 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDCA3Q99618 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 BNIP3P23-201ENST00000599655 511 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AC068313.1-201ENST00000604028 1008 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AC107214.2-201ENST00000608204 634 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms