Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RPL23AP17-201ENST00000401064 499 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 DUTP5-201ENST00000406790 469 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-257P-201ENST00000410238 98 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AL030996.1-201ENST00000411430 235 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RPL18P10-201ENST00000425606 538 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RNU4-57P-201ENST00000515980 135 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AC104576.1-201ENST00000524225 88 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 MIR4282-201ENST00000583613 67 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AL162424.1-201ENST00000602325 221 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AL121917.1-203ENST00000605534 577 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AP001148.1-201ENST00000624124 2359 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 AC116667.1-201ENST00000604855 2072 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC092070.2-203ENST00000598377 3644 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 XIAPP3-201ENST00000312918 795 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 Y_RNA.127-201ENST00000363386 109 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-290P-201ENST00000365212 101 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-102P-201ENST00000384485 104 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 Y_RNA.602-201ENST00000410535 92 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 RNU6-603P-201ENST00000411403 107 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC004975.1-201ENST00000428733 208 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AP000926.1-201ENST00000479573 241 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 RPL21P103-201ENST00000479921 488 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC007016.1-201ENST00000512110 244 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC005798.1-201ENST00000513715 387 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC016065.2-201ENST00000514530 444 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 ACA59.1-201ENST00000515966 143 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 FAM60BP-201ENST00000578364 658 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MIR4260-201ENST00000583107 67 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AL160281.1-201ENST00000605307 311 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 U6.92-201ENST00000636464 89 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC092747.4-201ENST00000620519 1861 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC007529.1-201ENST00000418574 2178 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MFSD8-216ENST00000641147 4009 ntBASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.45□□□□□ -1.54
CNTNAP3BQ96NU0 AC097063.1-201ENST00000426714 1797 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 HSPA8P4-201ENST00000511877 1920 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 SNORD113-8-201ENST00000363497 74 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 RN7SKP186-201ENST00000365371 303 ntBASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CNTNAP3BQ96NU0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms