Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00477Q96M19 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC00477Q96M19 Z82195.2-201ENST00000612348 18351 ntBASIC2.27□□□□□ -2.05
LINC00477Q96M19 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC00477Q96M19 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC00477Q96M19 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 FAM133CP-201ENST00000332869 704 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RNU6-289P-201ENST00000364093 107 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RNVU1-3-201ENST00000364313 161 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 ANAPC10P1-201ENST00000395991 556 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL357075.1-201ENST00000404107 726 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RNU6-712P-201ENST00000410558 100 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RNU2-47P-201ENST00000410649 186 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 HMGN2P35-201ENST00000412164 270 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 HIGD1AP15-201ENST00000416198 280 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 BX119904.4-201ENST00000424402 301 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL593851.1-201ENST00000426171 157 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL590233.1-201ENST00000430017 456 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC016696.1-201ENST00000446949 318 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 MTCO2P25-201ENST00000447065 681 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 MTND1P31-201ENST00000449206 961 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 RPL23AP31-201ENST00000456160 467 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL031183.1-201ENST00000457667 207 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RPL31P50-201ENST00000471002 296 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RPL7P18-201ENST00000478965 734 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 DSTNP2-201ENST00000504533 515 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC00477Q96M19 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 RNU5A-4P-201ENST00000516588 111 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 OR5AK1P-201ENST00000524837 922 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC107016.2-201ENST00000547968 190 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC00477Q96M19 MTND3P12-201ENST00000559068 328 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC011260.1-201ENST00000578420 472 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC022022.2-201ENST00000602989 360 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 U73023.1-201ENST00000603134 700 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC109809.1-201ENST00000619665 545 ntBASIC2.26□□□□□ -2.05
LINC00477Q96M19 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC00477Q96M19 AC087359.1-201ENST00000508335 1740 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC00477Q96M19 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AL391994.1-201ENST00000254724 282 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 MIR22-201ENST00000362190 85 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 RNU6-1200P-201ENST00000384162 107 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 SNORD67-201ENST00000390833 111 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 RNA5SP252-201ENST00000391131 119 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 RPS15AP38-201ENST00000413110 372 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AL096701.2-201ENST00000416920 238 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 MTCYBP38-201ENST00000417160 1123 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 TIMM9P2-201ENST00000419324 266 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 TMEM167AP1-201ENST00000423409 219 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AL606662.1-201ENST00000445763 553 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 MTCYBP11-201ENST00000447254 1109 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AP004217.1-201ENST00000480579 346 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC023424.2-201ENST00000493479 777 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC034244.1-201ENST00000507687 207 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 RN7SKP272-201ENST00000516988 232 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 DUXAP2-201ENST00000519198 589 ntBASIC2.25□□□□□ -2.05
LINC00477Q96M19 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC00477Q96M19 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC00477Q96M19 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms