Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 AC091965.5-201ENST00000624785 342 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AL159972.1-201ENST00000625150 448 ntBASIC3.09□□□□□ -1.91
RFT1Q96AA3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.09□□□□□ -1.91
RFT1Q96AA3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFT1Q96AA3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.92
RFT1Q96AA3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RFT1Q96AA3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.92
RFT1Q96AA3 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.92
RFT1Q96AA3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFT1Q96AA3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFT1Q96AA3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 Y_RNA.436-201ENST00000384097 102 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 RPL7P2-201ENST00000427639 268 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AL512649.1-201ENST00000428997 581 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 FAM103A2P-201ENST00000444122 354 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AP1S2P1-201ENST00000457344 379 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 MTND3P7-201ENST00000474435 343 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 RAP1BP2-201ENST00000478270 544 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 MTND1P22-201ENST00000510572 951 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 SNORA31.26-201ENST00000517250 137 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC013828.2-201ENST00000532487 235 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC060771.1-201ENST00000582031 164 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 AL603758.1-201ENST00000618654 241 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 MTND4P16-201ENST00000466108 1367 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFT1Q96AA3 AC008568.2-201ENST00000623862 2313 ntBASIC3.08□□□□□ -1.92
RFT1Q96AA3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFT1Q96AA3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.08□□□□□ -1.92
RFT1Q96AA3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFT1Q96AA3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC103988.1-201ENST00000566382 2177 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 CUL1P1-201ENST00000509510 2425 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RNU5A-1-201ENST00000362698 116 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RNU6-660P-201ENST00000364566 109 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC007066.1-201ENST00000392902 381 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AL021407.1-201ENST00000404531 386 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RN7SKP156-201ENST00000410308 342 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RN7SKP53-201ENST00000411337 315 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RNU6-516P-201ENST00000411381 104 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AL359704.1-201ENST00000411586 781 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 BTF3L4P1-201ENST00000413813 468 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC245054.1-201ENST00000420944 258 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AL390023.1-201ENST00000428836 262 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 LARP1BP3-201ENST00000437229 869 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 RPL36AP33-201ENST00000450395 310 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RPL23AP67-201ENST00000465341 474 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC072039.1-201ENST00000477611 581 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RPS3AP43-201ENST00000479743 781 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC111000.2-201ENST00000507775 550 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 Y_RNA.655-201ENST00000515919 96 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC107934.2-201ENST00000518653 310 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC007991.1-201ENST00000522680 631 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 OR8R1P-201ENST00000543943 764 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms