Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AF131216.2-201ENST00000512316 564 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC017037.2-201ENST00000513850 890 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 IGHV3-76-201ENST00000522465 295 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 OR5D17P-201ENST00000531492 978 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 UBE2L4-201ENST00000587688 464 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AL359999.1-201ENST00000604513 294 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AL590099.1-201ENST00000615276 138 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC018755.4-201ENST00000619715 454 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AL158801.5-201ENST00000623123 465 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 AC079597.1-201ENST00000624306 508 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 TEX21P-201ENST00000447107 1476 ntBASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC44A1Q8WWI5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC011460.1-201ENST00000636268 1834 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 FRG1CP-201ENST00000358464 769 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 Y_RNA.46-201ENST00000362695 102 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-335P-201ENST00000364563 113 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RNA5SP189-201ENST00000364920 115 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 Y_RNA.548-201ENST00000384656 105 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 PTMAP2-201ENST00000397627 327 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-712P-201ENST00000410558 100 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RNU2-16P-201ENST00000410712 136 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC093578.1-201ENST00000415219 368 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RPS7P15-201ENST00000415804 584 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 TOMM22P1-201ENST00000418578 312 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 BX890604.2-201ENST00000427883 474 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 GOT2P5-201ENST00000433995 546 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 UBE2V1P13-201ENST00000436983 439 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 PGBD4P3-201ENST00000440731 581 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-1095P-201ENST00000516148 108 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC018630.1-201ENST00000541376 925 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 CR383656.7-201ENST00000548164 174 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 ZNF519P3-201ENST00000557158 1032 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC034268.2-201ENST00000571784 482 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 BNIP3P8-201ENST00000597863 560 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC011451.2-201ENST00000604303 598 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AL121772.2-201ENST00000614331 297 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC039056.2-201ENST00000622261 511 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 CR392039.5-201ENST00000623201 510 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 MIR7153-201ENST00000637758 57 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 AC099654.13-201ENST00000639774 207 ntBASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SLC44A1Q8WWI5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-600P-201ENST00000362524 99 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RNA5SP124-201ENST00000362739 110 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 OR5H15-201ENST00000383696 930 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 DEFB108C-201ENST00000400154 252 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RNU6-248P-201ENST00000410720 107 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 EI24P1-201ENST00000416584 867 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL353777.1-201ENST00000425552 326 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL589823.1-201ENST00000429577 183 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 RPL21P112-201ENST00000434403 463 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 CYCSP43-201ENST00000438233 310 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 PDSS1P2-201ENST00000449397 678 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 AL033528.1-201ENST00000453780 140 ntBASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.49□□□□□ -1.85
SLC44A1Q8WWI5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms