Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AL161781.1-201ENST00000354277 403 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.84-201ENST00000363011 104 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RNY3P11-201ENST00000364153 102 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.237-201ENST00000364439 102 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1117P-201ENST00000384525 104 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 MIR1298-201ENST00000408783 112 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RN7SKP235-201ENST00000410662 305 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 BX682237.1-201ENST00000415016 335 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RPL23AP4-201ENST00000427757 463 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC010881.1-201ENST00000433830 235 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RPL35AP21-201ENST00000437667 333 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SCARNA18-201ENST00000459004 134 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC006967.1-201ENST00000467608 589 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RPL23AP71-201ENST00000470966 469 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 TBCAP3-201ENST00000512475 312 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1278P-201ENST00000516130 107 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SNORA25.14-201ENST00000516481 132 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC090115.3-201ENST00000553218 849 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC008687.2-201ENST00000597865 520 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC245517.5-201ENST00000611529 162 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC064801.1-201ENST00000612025 407 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC005344.1-201ENST00000613391 459 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AL445363.3-201ENST00000623080 671 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AL450472.1-202ENST00000637286 180 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 CASC19-284ENST00000642142 1868 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC009643.2-201ENST00000603543 1448 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 TLK1P1-201ENST00000456760 2440 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RNU6-511P-201ENST00000363496 107 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RNU6-398P-201ENST00000384143 109 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 Y_RNA.577-201ENST00000384794 101 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC007738.1-201ENST00000413892 348 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RPL7P46-201ENST00000425129 740 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC092162.1-201ENST00000432828 434 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RPL23AP22-201ENST00000437556 453 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RPS29P33-201ENST00000456717 146 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 DYNLL1P5-201ENST00000467158 270 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RN7SL809P-201ENST00000482040 297 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 FTH1P21-201ENST00000512179 511 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RNU7-200P-201ENST00000516105 62 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1069P-201ENST00000516612 133 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC133555.2-201ENST00000550213 292 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC005899.2-201ENST00000584353 90 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC073410.2-201ENST00000603240 332 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 uc_338.18-201ENST00000615451 175 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 MIR6853-201ENST00000619642 74 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 U6.114-201ENST00000636407 96 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 Z95327.2-201ENST00000414579 1873 ntBASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NEDD1Q8NHV4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.65□□□□□ -1.5
NEDD1Q8NHV4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms