Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC011468.4-201ENST00000603942 409 ntBASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 AL035413.2-201ENST00000604801 525 ntBASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 AP003117.2-201ENST00000606010 545 ntBASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 BX664608.1-201ENST00000610519 487 ntBASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 AC244100.1-202ENST00000621554 382 ntBASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF548Q8NEK5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC130650.2-201ENST00000618736 2403 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 MTND5P28-201ENST00000438005 1594 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU4-1-201ENST00000363925 141 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU6-877P-201ENST00000383868 107 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 U1.1-201ENST00000384101 164 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 Y_RNA.481-201ENST00000384373 102 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU6-1009P-201ENST00000390996 107 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU6-908P-201ENST00000410160 94 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC078974.1-201ENST00000411597 223 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 ZNF90P2-204ENST00000419323 1075 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AL353193.1-201ENST00000421444 268 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 CALM1P1-201ENST00000442082 433 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC087879.1-201ENST00000474343 374 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AP001025.2-201ENST00000490908 477 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC093677.1-201ENST00000514414 678 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC090281.1-201ENST00000523019 276 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC012507.3-201ENST00000603556 477 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC139792.3-201ENST00000623525 224 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AC009033.1-201ENST00000624279 431 ntBASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZNF548Q8NEK5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC092447.10-201ENST00000620607 1652 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC092326.2-201ENST00000624772 1561 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC024560.2-201ENST00000507981 1497 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 MTND4P23-201ENST00000447723 1363 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC018529.3-201ENST00000624212 2254 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 Y_RNA.160-201ENST00000363677 92 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 Y_RNA.279-201ENST00000364763 95 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 RNU1-39P-201ENST00000383897 165 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AL356776.1-201ENST00000406574 447 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 SNRPEP10-201ENST00000420249 274 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 RPS12P5-201ENST00000423449 371 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 OR51AB1P-201ENST00000429046 620 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC083863.1-201ENST00000438811 231 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 HSPE1P28-201ENST00000443139 211 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 UBDP1-202ENST00000457888 382 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 PABPC1P3-201ENST00000469174 459 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC023194.1-201ENST00000493084 308 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 HMGN1P12-201ENST00000499125 195 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 VWA8P1-201ENST00000510889 176 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 Vault.3-201ENST00000516676 95 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 RN7SKP277-201ENST00000516895 283 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 RN7SKP234-201ENST00000517173 224 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AP003072.2-201ENST00000527756 676 ntBASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.81□□□□□ -1.8
ZNF548Q8NEK5 GLYCAM1-201ENST00000546596 285 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms