Protein–RNA interactions for Protein: Q8NDQ6

ZNF540, Zinc finger protein 540, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540Q8NDQ6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.98□□□□□ -1.93
ZNF540Q8NDQ6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.98□□□□□ -1.93
ZNF540Q8NDQ6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 RNU6-224P-201ENST00000384055 107 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 RNU6-1000P-201ENST00000391066 106 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 HMGN1P24-201ENST00000412282 298 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 Z75741.2-201ENST00000417272 1167 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL139421.1-201ENST00000423010 169 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 Z82210.1-201ENST00000440037 231 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 FGF7P5-201ENST00000441829 291 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 OR6K1P-201ENST00000456766 971 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC118282.1-201ENST00000506408 765 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC069306.1-201ENST00000507006 843 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC068135.2-201ENST00000569293 1028 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL158050.2-201ENST00000605336 568 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL050303.3-201ENST00000613704 284 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AC091953.5-201ENST00000622919 233 ntBASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
ZNF540Q8NDQ6 AL022578.1-201ENST00000439330 1433 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 TPMTP2-201ENST00000414372 726 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL161449.1-201ENST00000414531 1199 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL139281.1-201ENST00000422120 335 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 RPL7P44-201ENST00000424827 742 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC006028.1-201ENST00000438379 402 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 PIGFP3-201ENST00000441918 722 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC092155.2-201ENST00000454675 477 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 SNORD121B-201ENST00000458838 81 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 RN7SKP31-201ENST00000516354 278 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 RNU6-840P-201ENST00000517275 65 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL132857.1-201ENST00000555180 708 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC010546.1-201ENST00000569391 485 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC034229.4-201ENST00000607861 441 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC027449.1-201ENST00000608890 407 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL161734.1-201ENST00000609720 557 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AL442067.2-201ENST00000614033 363 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC079395.3-201ENST00000615161 484 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
ZNF540Q8NDQ6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 PABPC1P9-201ENST00000426076 1612 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 Y_RNA.234-201ENST00000364409 97 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 RNA5SP120-201ENST00000410900 112 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC009414.1-201ENST00000427200 443 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC011242.1-201ENST00000433596 1158 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC004854.1-201ENST00000440356 349 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AL049734.2-201ENST00000441066 616 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 CBWD4P-201ENST00000445695 655 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC104982.1-201ENST00000478775 574 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC093677.1-201ENST00000514414 678 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 HMGN1P28-201ENST00000521340 364 ntBASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF540Q8NDQ6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms