Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNA5SP477-201ENST00000362639 119 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-37P-201ENST00000362692 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1155P-201ENST00000363554 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-11P-201ENST00000364234 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNA5SP433-201ENST00000364491 114 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-7-201ENST00000364784 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-8-201ENST00000365467 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-25P-201ENST00000383873 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1-201ENST00000383898 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.405-201ENST00000383979 100 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-36P-201ENST00000384172 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.451-201ENST00000384200 100 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-4P-201ENST00000384205 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-5P-201ENST00000384238 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-3P-201ENST00000384314 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-16P-201ENST00000384385 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-15P-201ENST00000384534 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.524-201ENST00000384564 100 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-2-201ENST00000384627 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-29P-201ENST00000384637 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.561-201ENST00000384694 100 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-9-201ENST00000384776 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 SNORA53-201ENST00000391141 249 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-603P-201ENST00000411403 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC016769.2-201ENST00000414815 475 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC126120.1-201ENST00000431082 470 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC090804.1-201ENST00000448870 490 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC025458.1-201ENST00000506046 166 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-313P-201ENST00000516317 112 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-62P-201ENST00000516526 102 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-1012P-201ENST00000516606 109 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 SNORA31.18-201ENST00000517043 134 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC025755.1-201ENST00000521306 278 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 IGLV3-30-201ENST00000524362 298 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 MRPS18CP4-201ENST00000535821 231 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AP000787.2-201ENST00000604432 568 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RNU6-6P-201ENST00000606623 107 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC116447.1-201ENST00000613153 453 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 Z99571.1-201ENST00000636677 394 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 AC008725.1-201ENST00000605123 2263 ntBASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC116Q8IYX3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 RN7SKP227-201ENST00000364445 330 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 RNU6-827P-201ENST00000365553 106 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.504-201ENST00000384481 104 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 SNORD78.2-201ENST00000391076 69 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 SNORA68.2-201ENST00000391263 128 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 U3.39-201ENST00000408569 239 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 RNU2-43P-201ENST00000410306 190 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 MRPL53P1-201ENST00000414323 319 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AL451062.2-201ENST00000427515 271 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 EIF5AP4-201ENST00000441206 465 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 U8.22-201ENST00000459141 133 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AC034236.1-201ENST00000469891 373 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 Y_RNA.706-201ENST00000516933 99 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AC104581.2-201ENST00000572227 430 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 MIR4659A-201ENST00000580269 81 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AC060780.2-201ENST00000589047 198 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 AC011476.5-201ENST00000615594 130 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 MIR6778-201ENST00000617912 73 ntBASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC116Q8IYX3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms