Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CCDC60Q8IWA6 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
CCDC60Q8IWA6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC60Q8IWA6 AC087359.1-201ENST00000508335 1740 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL391994.1-201ENST00000254724 282 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 Y_RNA.18-201ENST00000362461 102 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 DEFB109C-201ENST00000382575 264 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 DEFB109B-201ENST00000382656 264 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 RPL7P8-201ENST00000411964 730 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC234781.2-201ENST00000426370 994 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL035407.1-201ENST00000429211 571 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL139132.1-201ENST00000431587 344 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 MTND4LP10-201ENST00000435146 291 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 MUPP-201ENST00000438111 566 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL831737.1-201ENST00000441288 271 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 RPL37P4-201ENST00000448908 268 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 RPS24P6-201ENST00000452670 400 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 snoU109.4-201ENST00000458953 143 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 MTCO2P6-201ENST00000463134 685 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC096576.1-201ENST00000489014 359 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 RNU1-103P-201ENST00000516502 125 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 SNORA64.4-201ENST00000516632 81 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC008015.1-201ENST00000555505 465 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL357080.1-201ENST00000617394 239 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AP003485.2-201ENST00000623636 610 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL137790.1-201ENST00000634283 177 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC007671.2-201ENST00000637344 619 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AC000403.1-201ENST00000613696 3585 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 AL049780.3-201ENST00000624612 1583 ntBASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC60Q8IWA6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 SNORA80A-201ENST00000363922 136 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RNU2-47P-201ENST00000410649 186 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 MTCO3P12-201ENST00000416718 547 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 COTL1P1-201ENST00000422309 375 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 MTND1P20-201ENST00000430341 950 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RPL23AP22-201ENST00000437556 453 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC025750.2-201ENST00000442609 450 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AL606662.1-201ENST00000445763 553 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 PAXBP1P1-201ENST00000449315 447 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RPS27AP1-201ENST00000475545 471 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC012181.1-201ENST00000479895 423 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 HMGB1P36-201ENST00000487709 576 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC097462.2-201ENST00000504623 481 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 SCARNA13-201ENST00000516672 275 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RPL12P22-201ENST00000519073 490 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 COX6CP8-201ENST00000522620 226 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC002400.1-201ENST00000569310 726 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AP000811.1-201ENST00000603803 651 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC004853.1-201ENST00000604902 698 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC018714.1-201ENST00000605028 208 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 RNU6-88P-201ENST00000606801 100 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC024560.3-201ENST00000608482 349 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AL445264.1-201ENST00000621719 171 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AP000676.3-201ENST00000623299 569 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 AC004925.1-201ENST00000624256 2706 ntBASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC60Q8IWA6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC60Q8IWA6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms