Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2□□□□□ -2.09
LRRC28Q86X40 RNF2P1-201ENST00000442955 1010 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2□□□□□ -2.09
LRRC28Q86X40 AC233279.1-201ENST00000455300 423 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2□□□□□ -2.09
LRRC28Q86X40 AC008427.1-201ENST00000503102 655 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2□□□□□ -2.09
LRRC28Q86X40 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2□□□□□ -2.09
LRRC28Q86X40 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2□□□□□ -2.09
LRRC28Q86X40 TRAV28-201ENST00000557548 323 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2□□□□□ -2.09
LRRC28Q86X40 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 RPS15AP11-201ENST00000594193 385 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 VN1R88P-201ENST00000596787 292 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2□□□□□ -2.09
LRRC28Q86X40 AC103810.6-201ENST00000606708 136 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AL161629.2-201ENST00000615347 275 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2□□□□□ -2.09
LRRC28Q86X40 MIR1264-201ENST00000616374 69 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AL360181.4-201ENST00000621752 134 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AC097372.4-201ENST00000625025 466 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 ELF2P3-201ENST00000445099 1506 ntBASIC2□□□□□ -2.09
LRRC28Q86X40 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
LRRC28Q86X40 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
LRRC28Q86X40 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC28Q86X40 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC28Q86X40 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 OR5H15-201ENST00000383696 930 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 RNU4-53P-201ENST00000410828 140 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 MTATP6P11-201ENST00000428071 670 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC104073.1-201ENST00000451988 151 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 MTND2P3-201ENST00000452458 470 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 BX248409.1-201ENST00000455497 255 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC092798.1-201ENST00000458542 409 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 MIR3117-201ENST00000584034 78 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC28Q86X40 KATNBL1P1-201ENST00000605192 748 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC046143.2-201ENST00000609789 160 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AC073569.3-201ENST00000619055 682 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 MIR6766-201ENST00000622641 72 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 AL031601.2-202ENST00000622650 282 ntBASIC1.99□□□□□ -2.09
LRRC28Q86X40 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LRRC28Q86X40 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 OR56A5-201ENST00000340110 738 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RNA5SP258-201ENST00000362750 119 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RNU6-444P-201ENST00000383988 108 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RNU6-921P-201ENST00000384361 107 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RSL24D1P4-201ENST00000400938 484 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 SSXP10-201ENST00000402595 565 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AL355497.1-201ENST00000406262 551 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RN7SKP140-201ENST00000411196 284 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 RPP40P1-201ENST00000426762 456 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AL645638.1-201ENST00000440519 361 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 HIGD1AP2-201ENST00000446367 280 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 SNRPGP16-201ENST00000533275 226 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC104229.1-201ENST00000561364 255 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 ATP5F1P7-201ENST00000567330 760 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 HSPE1P7-201ENST00000604681 321 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 BNIP3P4-201ENST00000604946 565 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC106900.2-201ENST00000604994 317 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AP004247.3-201ENST00000608682 624 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC096586.1-201ENST00000610267 561 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC005858.4-201ENST00000623191 700 ntBASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC28Q86X40 RNU6-461P-201ENST00000364195 107 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LRRC28Q86X40 RNU6-77P-201ENST00000410554 91 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AL009174.1-201ENST00000426577 416 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 RPS15AP28-201ENST00000435088 386 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms