Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.71□□□□□ -1.65
RNF111Q6ZNA4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNU6-989P-201ENST00000362756 107 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.252-201ENST00000364556 101 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.404-201ENST00000383978 102 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNU6-701P-201ENST00000384059 107 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 SNORA70-201ENST00000384436 135 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNU4-65P-201ENST00000410473 140 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC092447.6-201ENST00000414578 210 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RPS26P47-201ENST00000427219 348 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 IGHV5-78-201ENST00000450948 295 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RPL7AP6-201ENST00000477943 801 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.708-201ENST00000516950 96 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RN7SKP147-201ENST00000517154 244 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AP002404.1-201ENST00000532005 451 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC044860.2-201ENST00000561005 179 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC211433.2-201ENST00000608433 387 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC093799.2-201ENST00000610062 578 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AL442067.1-201ENST00000613261 223 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC140113.4-201ENST00000622087 222 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC110801.1-201ENST00000623590 212 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC007529.1-201ENST00000418574 2178 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 AC009951.1-201ENST00000623674 2614 ntBASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF111Q6ZNA4 SAGE4P-201ENST00000442271 3381 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.188-201ENST00000363952 111 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RNU6-393P-201ENST00000384475 107 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RNU6-1222P-201ENST00000384615 107 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RNU6-328P-201ENST00000390887 106 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AL445189.1-201ENST00000405722 338 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RNU6-1050P-201ENST00000410388 107 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RPLP0P7-201ENST00000416050 667 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RPL7P10-201ENST00000417407 739 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RPL21P109-201ENST00000422213 475 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 FAR2P4-202ENST00000425399 584 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 GSTA11P-201ENST00000452866 669 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AP001086.1-201ENST00000494882 321 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC026782.1-201ENST00000512952 449 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 SNORA14.1-201ENST00000516113 141 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.670-201ENST00000516255 105 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 RNU1-54P-201ENST00000517181 120 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC100870.1-201ENST00000522035 505 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC105254.2-201ENST00000603636 436 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 MIR6719-201ENST00000622428 87 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 OR51H2P-202ENST00000641424 3046 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.7□□□□□ -1.66
RNF111Q6ZNA4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC005332.5-201ENST00000591222 2919 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU1-20P-201ENST00000363314 162 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU6-784P-201ENST00000384330 106 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms