Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NCAPGP2-201ENST00000557911 754 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 MIR3146-201ENST00000580367 79 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 MIR4286-201ENST00000580651 93 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 MIR3158-1-201ENST00000583596 81 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 AL353997.4-201ENST00000586196 166 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 AC073539.2-201ENST00000597113 165 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNKSR3Q6P9H4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC104260.2-201ENST00000623551 3497 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-702P-201ENST00000364982 107 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.557-201ENST00000384680 107 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RNA5SP171-201ENST00000391071 115 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RN7SKP158-201ENST00000410453 326 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 HMGB3P2-201ENST00000411913 584 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL133384.1-201ENST00000412744 351 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC009237.10-201ENST00000414112 510 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RPS15AP40-201ENST00000419621 391 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 CKS1BP6-201ENST00000424932 240 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RPS20P5-201ENST00000434808 360 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC114495.1-201ENST00000441274 436 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 MTCO3P10-201ENST00000455912 772 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RN7SL542P-201ENST00000467147 294 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC083904.1-201ENST00000487828 231 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL118558.2-201ENST00000556294 238 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RN7SL600P-201ENST00000581811 299 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 GLUD1P4-201ENST00000590914 418 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL670379.11-201ENST00000604059 253 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL670379.10-201ENST00000604330 253 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL670379.12-201ENST00000605291 253 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AL670379.9-201ENST00000605428 253 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 MIR6867-201ENST00000610636 67 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC022418.1-201ENST00000624118 445 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC090337.1-201ENST00000579651 2074 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 AC107068.1-201ENST00000563286 4218 ntBASIC4.79□□□□□ -1.64
CNKSR3Q6P9H4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AC011978.2-201ENST00000569835 2054 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.22-201ENST00000362492 102 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.149-201ENST00000363558 117 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 Y_RNA.158-201ENST00000363651 101 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-1188P-201ENST00000363795 107 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SNORA63.7-201ENST00000365579 123 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AC117470.1-201ENST00000381974 330 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-26P-201ENST00000383985 107 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-39P-201ENST00000384344 107 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RNU6-903P-201ENST00000391270 109 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SSXP10-201ENST00000402595 565 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AL023807.1-201ENST00000407932 359 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 BX323014.1-201ENST00000412876 237 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AC012065.2-201ENST00000421295 375 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 OR4K11P-201ENST00000431829 904 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 RPL21P89-201ENST00000444021 467 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 MRPL48P1-201ENST00000445390 636 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 AC107399.1-201ENST00000451226 265 ntBASIC4.78□□□□□ -1.64
CNKSR3Q6P9H4 SUMO1P2-201ENST00000452524 304 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms