Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RNA5SP283-201ENST00000365604 119 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.459-201ENST00000384251 102 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 SNORD116-29-201ENST00000384516 83 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-146P-201ENST00000384602 108 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 MIR548F5-201ENST00000408421 86 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RPL31P2-201ENST00000413849 377 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 MTND3P2-201ENST00000438452 342 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 HMGB3P11-201ENST00000440127 604 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 PRPS1P1-201ENST00000445305 876 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 ISCUP1-201ENST00000454451 448 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AL162395.1-201ENST00000457882 422 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 RPS20P21-201ENST00000466859 343 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC016065.2-201ENST00000514530 444 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.711-201ENST00000516993 102 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 MYL12AP1-201ENST00000518490 515 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 FAM60DP-201ENST00000524174 632 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC008737.2-201ENST00000599446 118 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC007566.2-201ENST00000603642 413 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC113403.1-201ENST00000604910 193 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AL080274.1-201ENST00000605565 220 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC092807.2-201ENST00000609367 243 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 uc_338.11-201ENST00000619132 160 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AL136313.1-201ENST00000624804 202 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 AC005332.5-201ENST00000591222 2919 ntBASIC5.57□□□□□ -1.52
PRPF40BQ6NWY9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.301-201ENST00000364990 103 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 SNORD96B-201ENST00000386148 79 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 MTCYBP4-201ENST00000401524 249 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC018630.2-202ENST00000422992 927 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 Z82205.1-201ENST00000428456 297 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL118520.1-201ENST00000450770 291 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 RNU7-180P-201ENST00000459240 63 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC079804.1-201ENST00000461922 436 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL163540.1-201ENST00000485382 386 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC106872.2-201ENST00000494303 480 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 HMGB3P15-201ENST00000507326 574 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC005741.1-201ENST00000511094 432 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AP001804.3-201ENST00000525146 880 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL133153.1-201ENST00000557756 303 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC007151.1-201ENST00000572774 483 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 CTHRC1P1-201ENST00000605383 469 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL390240.1-201ENST00000612950 384 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC112200.1-201ENST00000625015 234 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PRPF40BQ6NWY9 AL451142.2-201ENST00000429076 2090 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL139276.1-201ENST00000311910 1001 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 MIR331-201ENST00000362302 94 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-639P-201ENST00000384074 107 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 RN7SKP202-201ENST00000410439 330 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 Z74021.1-201ENST00000423610 407 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms