Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6□□□□□ -1.45
RNF20Q5VTR2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC008758.3-201ENST00000507003 1829 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 Y_RNA.222-201ENST00000364264 102 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 SNORA23-201ENST00000365128 182 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RNU6-214P-201ENST00000384130 107 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RNU6-842P-201ENST00000384269 107 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 SNORA66-201ENST00000384792 133 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RHOT1P3-201ENST00000436571 331 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AL359672.1-201ENST00000442302 409 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 GAPDHP27-201ENST00000447427 1020 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC008481.1-201ENST00000463278 396 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RPL9P32-201ENST00000464118 620 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RN7SL222P-201ENST00000476452 299 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC004453.1-201ENST00000487895 408 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RN7SL346P-201ENST00000491561 294 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC105758.1-201ENST00000506038 399 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC100870.1-201ENST00000522035 505 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC012339.2-201ENST00000523996 453 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC091516.1-201ENST00000549191 703 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 MIR3128-201ENST00000581957 66 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 RN7SL435P-201ENST00000584418 282 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AL359547.2-201ENST00000615810 418 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 AC110801.1-201ENST00000623590 212 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF20Q5VTR2 ZNF72P-201ENST00000425869 1908 ntBASIC5.99□□□□□ -1.45
RNF20Q5VTR2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC010615.1-201ENST00000594254 1764 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 SNORA73.1-201ENST00000363107 205 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 Y_RNA.350-201ENST00000365409 98 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MIR1252-201ENST00000408861 65 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 RNU6-293P-201ENST00000411259 106 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 IGHV5-78-201ENST00000450948 295 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AL691482.1-201ENST00000453255 87 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 RPS23P3-201ENST00000470993 430 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC010631.1-201ENST00000474150 156 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC108860.1-201ENST00000484521 383 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 RN7SL244P-201ENST00000493405 297 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 VN1R104P-201ENST00000505115 1009 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 COX6B1P5-201ENST00000509843 249 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 Y_RNA.689-201ENST00000516589 107 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 CYCSP27-201ENST00000527643 293 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MIR1269B-201ENST00000580405 75 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC233702.9-201ENST00000581528 203 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC105254.2-201ENST00000603636 436 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 MTND4LP5-201ENST00000605152 292 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 AC233263.6-201ENST00000631132 1963 ntBASIC5.98□□□□□ -1.45
RNF20Q5VTR2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF20Q5VTR2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 STX3-208ENST00000641815 3236 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SNURFL-201ENST00000309296 343 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC138393.1-203ENST00000327086 343 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SNORD14.1-201ENST00000365609 90 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 RNU6-1062P-201ENST00000383908 107 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SNORA70.10-201ENST00000384515 134 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 SNORA41-201ENST00000384675 132 ntBASIC5.97□□□□□ -1.45
RNF20Q5VTR2 AC013442.1-201ENST00000397347 228 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms